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Subramanian S, Cho U-H, Keyes CA, Yu O (2009) Proteomic
analysis of soybean xylem sap in response to symbiotic and pathogenic
interactions. BMC Plant Biology 2009, 9:119.
(http://www.biomedcentral.com/1471-2229/9/119 ). |
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Gutierrez-Gonzalez JJ, Wu X, Zhang J, Lee JD, Ellersieck M,
Shannon GJ, Yu O, Nguyen HT, Sleper DA (2009) Genetic control
of soybean seed isoflavone content: Importance of statistical model and
epistasis in complex traits. Theoretical and Applied Genetics, 119:
1069-1083. |
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Zhang J, Yu O (2008) Metabolic engineering of
isoflavone biosynthesis in seeds. In Modification of seed
composition to promote health and nutrition. Hari Krishnan (ed).
Agronomy Monograph Series, pp 151-177. |
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Zhang J, Subramanian S, Stacey G, Yu O (2008) Flavones and flavonols
play distinct critical roles during nodulation of Medicago
truncatula by Sinorhizobium meliloti. The Plant Journal,
57: 171-183. |
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Cheng H, Yu O, Yu D (2008) Polymorphisms of IFS1 and IFS2
genes are associated with isoflavone concentrations in soybean seeds.
Plant Science, 175: 505-512. |
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Li L, He H, Zhang J, Wang X, Bai S, Stolc V,Tongprasit W, Young
ND, Yu O, Deng XW (2008) Transcriptional analysis of highly
syntenic regions between Medicago truncatula and Glycine
max using tiling microarrays. Genome Biology, 9: R57. (http://genomebiology.com/2008/9/3/R57). |
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Yu O, Jez JM (2008) Nature’s assembly line:
Biosynthesis of simple phenylpropanoid and polyketide. Plant Journal 54:
750-762. |
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Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O (2008) Novel
and nodulation-regulated microRNAs in soybean roots. BMC Genomics 9: 160
(http://www.biomedcentral.com/1471-2164/9/160). |
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Schroeder AC, Kumaran S, Hicks LM, Cahoon RE, Halls C, Yu O, Jez JM
(2008) Contributions of conserved serine and tyrosine residues to
catalysis, ligand binding, and cofactor processing in the active site of
tyrosine ammonia lyase. Phytochemistry 69: 1496-1506. |
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Graham TL, Graham MY, Yu O (2008) Genomics of secondary metabolism in
soybean. In Genomics of soybean. Gary Stacey (ed), in press.
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Halls, C, Yu O (2008) Potential for metabolic engineering of resveratrol
biosynthesis. Trends in Biotechnology, 26:77-81. |
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Zhang J, Subramanian S, Zhang
Y, Yu O (2007) Flavone synthases from Medicago truncatula are
flavanone-2-hydroxylases and are important for nodulation. Plant
Physiology 144: 741-751
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Graham TL, Graham MY,
Subramanian S, Yu O (2007) RNAi silencing of
genes for elicitation or biosynthesis of 5-deoxyisoflavonoids suppresses
race-specific resistance and HR cell death in Phytophthora sojae
infected tissues. Plant Physiology 144: 724-740.
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Subramanian S, Stacey G, Yu O
(2007) Distinct, critical roles of flavonoids
during determinate and indeterminate legume nodulation. Trends in Plant
Science 12: 282-285. |
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Subramanian S., Stacey G., Yu
O
(2006) Endogenous isoflavones are
essential for soybean-Bradyrhizobium
japonicum interactions. Plant Journal 48:
261-273.
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Zhang Y, Liu ZH, Jia L, Peng
ZL, Jaworski J, Wang XM, Jez J., Chen F, Yu O
(2006) Metabolic engineering of de novo biosynthesis of
resveratrol in Saccharomyces cerevisiae
and mammalian cells. Journal of American Chemistry Society. 128:
13030-13031. Featured in Chemical and Engineering News, 84 (Oct. 2,
2006): page 43.
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Ralston L, Yu O.
(2006) Metabolons involving plant cytochrome P450s.
Phytochemistry Review. 5: 459-472.
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Yu O.
(2006) Metabolic engineering of
the plant phenylpropanoid pathway. Encyclopedia of Plant and Crop
Science, Dekker Publishing. DOI: 10.1081/E-EPCS-120010589.
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Yu O, Matsuno M, Subramanian S.
(2006) Flavonoids in flowers:
Genetics and Biochemistry. In Floriculture, ornamental and plant
biotechnology: Advances and topical issues (1st Edition), Jaime A
Teixeira da Silva (ed.), pp. 283-293.
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Ralston L, Subramanian S, Matsuno M, Yu O.
(2005) Partial reconstruction of flavonoid and isoflavonoid biosynthesis
in yeast (Saccharomyces cerevisiae) using soybean type I and type
II chalcone isomerases. Plant Physiology 137: 1375-1388.
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Subramainan S, Graham ML, Yu O, Graham T.
(2005) Silencing of soybean isoflavone synthase through an RNAi approach
leads to silencing in non-transformed tissue and to enhanced
susceptibility to Phytophthora sojae. Plant Physiology 137:
1345-1353.
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Yu O, McGonigle B. (2005) Metabolic
engineering of isoflavone biosynthesis. Invited review. Advances in
Agronomy 86: 147-190.
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Subramanian S, Xu L, Lu G, Odell J, Yu
O. (2004) The promoters of the isoflavone synthase genes respond
differentially to nodulation and defense signals in transgenic soybean
roots. Plant Molecular Biology 54:226-239. |
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Bennett JO, Yu O, Heartherly LG,
Krishnan HB. (2004). Accumulation of genistein and daidzein, soybean
isoflavones implicated in promoting human health, is significantly
elevated by irrigation. Journal of Agricultural and Food Chemistry 52:
7574-7579. |
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Yu O, Shi J, Hession A, Maxwell C,
McGonigle B, Odell J. (2003) Metabolic engineering to increase
isoflavone biosynthesis in soybean seed. Phytochemistry 63: 753-763. |
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Yu O, Jung W, Shi J, Crose R, Fader G,
McGonigle B, Odell J. (2000) Production of the isoflavones genistein and
daidzein in non-legume dicot and monocot tissues. Isoflavone accumulation is
related to activity of the phenylpropanoid pathway. Plant Physiology 124:
781-793. |
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Jung W, Yu O, Lau CSM, O’keefe DP, Odell J,
Fader G, McGonigle B. (2000) Identification and expression of isoflavone
synthase, the key enzyme for biosynthesis of isoflavones in legumes. Nature
Biotechnology 18: 208-212. |
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