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Joe Jez Laboratory







Publications
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Washington University (2008-Present)
  63. He Y, Mawhinney TP, Preuss ML, Schroeder AC, Chen B, Abraham L, Jez JM, Chen S (2009) A redox active isopropylmalate dehydrogenase functions in the biosynthesis of glucosinolates and leucine in Arabidopsis. Plant J. (in press)
  62. Chen Q, Zhang B, Hicks LM, Wang S, Jez JM (2009) A liquid chromatography-tandem mass spectrometry-based assay for indole-3-acetic acid-amido synthetases. Anal. Biochem. 390, 149-154
  61. Jez JM, Krishnan HB (2009) Sulfur assimilation and cysteine biosynthesis in soybean seeds: towards engineering sulfur amino acid content In Modification of Seed Composition to Promote Health and Nutrition (Krishnan HB, Ed.), pp. 249-262, ASA-CSSA-SSSA Publishing, Madison, WI
  60. Alvarex S, Berla BM, Sheffield J, Cahoon RE, Jez JM, Hicks LM (2009) Comprehensive analysis of the Brassica juncea root proteome in response to cadmium exposure by complementary proteomic approaches. Proteomics 9, 2419-2431
  59. Yi H, Preuss ML, Jez JM (2009) The devil (and an active jasmonate hormone) are in the details. Nature Chem. Biol. 5, 273-274
  58. Kumaran S, Yi H, Krishnan HB, Jez JM (2009) Assembly of the cysteine synthase complex and the regulatory role of protein-protein interactions. J. Biol. Chem. 284, 10268-10275

Donald Danforth Plant Science Center (2002-Present)
  57. Jez JM, Fukagawa NK (2008) Plant sulfur compounds and human health In Sulfur: A Missing Link Between Soils, Crops, and Nutrition (Jez JM, Ed.), pp. 281-292, ASA-CSSA-SSSA Publiishing, Madison, WI
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56. Yu O, Jez JM (2008) Nature's assembly line: biosynthesis of simple phenylpropanoids and plant polyketides. Plant J. 54, 750-762

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55. Schroeder AC, Kumaran S, Hicks LM, Cahoon RE, Halls C, Yu O, Jez JM (2008) Contributions of conserved serine and tyrosine residues to catalysis, ligand binding, and cofactor processing in the active site of tyrosine ammonia lyase. Phytochemistry 69, 1496-1506

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54.  Arkus KAJ, Jez JM (2008) An integrated protein chemistry lab module: choloropyll and chlorophyllase.  Biochem. Mol. Biol. Educ. 36,125-128

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53.  Zubieta C, Arkus KAJ, Cahoon RE, Jez JM (2008) A single amino acid change is responsible for evolution of acyltransferase specificity in bacterial methionine biosynthesis.  J. Biol. Chem. 283, 7561-7567

 

52.  Kumaran S, Francois JA, Krishnan HB, Jez JM  (2008) Regulatory protein-protein interactions in primary metabolism: the case of the cysteine synthase complex In Sulfur Assimilation and Abiotic Stress in Plants (NA Khan, RP Singh, Eds), pp. 97-109, Springer-Verlag, NY

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51.  Phartiyal P, Kim WS, Cahoon RE, Jez JM, Krishnan HB (2008) The role of 5’-adenylylsulfate reductase in the sulfur assimilation pathway of soybean:  molecular cloning, gene expression, and kinetic characterization.  Phytochemistry  69, 356-364

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50.  Jez JM, Schachtman DP, Berg RH, Taylor CG, Chen S, Hicks LM, Jaworski JG, Smith TJ, Nielsen E, Pikaard CS (2007) Developing a new interdisciplinary lab course for undergraduate and graduate students: plant cells and proteins.  Biochem. Mol. Biol. Educ.  35, 410-415

PDF File 49. Hicks LM, Cahoon RE, Bonner ER, Rivard RS, Sheffield J, Jez JM (2007) Thiol-based regulation of redox-active glutamate-cysteine ligase from Arabidopsis thaliana. Plant Cell 19, 2653-2661
PDF File 48. Herrera K, Cahoon RE, Kumaran S, Jez JM (2007) Reaction mechanism of glutathione synthetase from Arabidopsis thaliana: site-directed mutagenesis of active site residues. J. Biol. Chem. 282, 17157-17165
PDF File 47. Fu CJ, Jez JM, Kerley MS, Allee GL, Krishnan HB (2007) Identification, characterization, epitope mapping, and three-dimensional modeling of alpha-subunit of beta-conglycinin of soybean, a potential allergen for young pigs. J. Agric. Food Chem. 55, 4014-4020
PDF File 46. Kumaran S, Jez JM (2007) Thermodynamics of the interaction between O-acetylserine sulfhydrylase and the C-terminus of serine acetyltransferase. Biochemistry 46, 5586-5594
PDF File 45. Shin R, Alvarez S, Burch AY, Jez JM, Schachtman DP (2007) Phosphoproteomic identification of targets of the Arabidopsis sucrose nonfermenting-like kinase SnRK2.8 reveals a connection to metabolic processes. Proc. Natl. Acad. Sci. USA 104, 6460-6465
PDF File 44. Brendza KM, Haakenson W, Cahoon RE, Hicks LM, Palavalli LH, Chiapelli B, McLaird M, McCarter JP, Williams DJ, Hresko MC, Jez JM (2007) Phosphoethanolamine N-methyltransferase (PMT-1) catalyzes the first reaction of a new pathway for phosphocholine biosynthesis in Caenorhabditis elegans. Biochem. J. 404, 439-448
PDF File 43. Jez JM (2007) Phosphatidylcholine biosynthesis as a potential target for inhibition of metabolism in parasitic nematodes. Curr. Enz. Inhib. 3, 133-142
PDF File 42. Francois JA, Kumaran S, Jez JM (2006) Structural basis for interaction of O-acetylserine sulfhydrylase and serine acetyltransferase in the Arabidopsis cysteine synthase complex. Plant Cell 18, 3647-3655
PDF File 41. Zhang Y, Li SZ, Pan X, Cahoon RE, Jaworski JG, Wang X, Jez JM, Chen F, Yu O (2006) Using unnatural protein fusions to engineer resveratrol biosynthesis in yeast and mammalian cells. J. Am. Chem. Soc. 128, 13030-13031
PDF File 40. Romanyuk ND, Rigden DJ, Vatamaniuk OK, Lang A, Cahoon RE, Jez JM, Rea PA (2006) Mutagenic definition of papain-like catalytic triad and sufficiency of N-terminal domain for single-site enzyme acylation and core catalysis by an eukaryotic phytochelatin synthase. Plant Physiol. 141, 858-869
PDF File 39. Phartiyal P, Kim WS, Cahoon RE, Jez JM, Krishnan HB (2006) Soybean ATP sulfurylase, a homodimeric enzyme involved in sulfur assimilation, is abundantly expressed in roots and induced by cold treatment. Arch. Biochem. Biophys. 450, 20-29
PDF File 38. Arkus KAJ, Jez JM (2006) Development of a high-throughput purification method and a continuous assay for chlorophyllase. Anal. Biochem. 353, 93-98
PDF File 37. Palavalli LH, Brendza KM, Haakenson W, Cahoon RE, McLaird M, Hicks LM, McCarter JP, Williams DJ, Hresko MC, Jez JM (2006) Defining the role of phosphomethylethanolamine N-methyltransferase from Caenorhabditis elegans in phosphocholine biosynthesis by biochemical and kinetic analysis. Biochemistry 45, 6056-6065
PDF File 36. Bonner ER, Cahoon RE, Knapke SM, Jez JM (2005) Molecular basis of plantcysteine biosynthesis: structural and functional analysis of O-acetylserinesulfhydrylase from Arabidopsis thaliana. J. Biol. Chem. 280: 38803-38813
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35. Arkus KAJ, Cahoon EB, Jez JM (2005) Mechanistic analysis of wheat chlorophyllase. Arch. Biochem. Biophys. 438, 146-155

PDF File 34. Jez JM, Cahoon RE (2004) Kinetic mechanism of glutathione synthetase from Arabidopsis
     thaliana
. J. Biol. Chem. 279, 42726-42731
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33. Jez JM, Cahoon RE, Chen S (2004) Arabidopsis thaliana glutamate-cysteine ligase: functional properties, kinetic mechanism, and regulation of activity. J. Biol. Chem. 279, 33463-33470


 Kosan Biosciences, Inc. (2001-2002)

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32. Jez JM, Chen JC, Rastelli J, Stroud RM, Santi DV (2003) Crystal structure and molecular modeling of 17-DMAG in complex with the N-terminal domain of human hsp90. Chem. Biol 10, 361-368


Post-doctoral work (Salk Institute 1998-2001)

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31. Jez JM, Bowman ME, Noel JP (2002) Expanding the biosynthetic repertoire of type III polyketide synthases by altering starter molecule specificity. Proc. Natl. Acad.Sci. USA 99, 5319-5324

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30. Jez JM, Bowman ME, Noel JP (2002) The role of hydrogen bonds in the reaction mechanism of chalcone isomerase. Biochemistry 41, 5168-5176

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29. Jez JM, Noel JP (2002) Reaction mechanism of chalcone isomerase: pH- dependence, diffusion control, and product binding differences. J. Biol. Chem. 277, 1361-1369

 

28. Noel JP, Jez JM, Austin MB, Bowman ME, Ferrer JL (2002) Structurally guided alteration of biosynthesis in plant type III polyketide synthases in Recent Advances in Phytochemistry Vol. 36 – Phytochemistry in the Genomics and Post-Genomics Era (JT Romeo, ed.) pp. 197-222, Plenum Press, New York

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27. Jez JM, Ferrer JL, Bowman ME, Austin MB, Schröder J, Dixon RA, Noel JP (2001) Structure and mechanism of chalcone synthase-like polyketide synthases. J. Ind. Micro. Biotech. 27, 393-398

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26. Jez JM, Bowman ME, Noel JP (2001) Structure-guided programming of polyketide chain-length determination in chalcone synthase. Biochemistry 49, 14829- 14838

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25. Mallis RJ, Bruzin K, Jez JM, Wilson EK, Dieckmann GR, Robic S, Harrahy J (2001) Proteins: the complete works. Trends Biochem. Sci. 26, 642-643

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24. Penning TM, Jez JM (2001) Enzyme redesign. Chem. Rev. 101, 3027-3046

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23. Jez JM, Noel JP (2000) Mechanism of chalcone synthase: pKa of the catalytic cysteine and the role of the conserved histidine in a plant-specific polyketide synthase. J. Biol. Chem. 275, 39640-39646

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22. Jez JM, Austin MB, Ferrer J-L, Bowman ME, Schröder J, Noel JP (2000) Structural control of polyketide formation in plant-specific polyketide synthases. Chem. Biol. 7, 919-930

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21. Jez JM, Bowman ME, Dixon RA, Noel JP (2000) Structure and mechanism of the evolutionarily unique plant enzyme chalcone isomerase. Nature Struct. Biol. 7, 786-791

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20. Jez JM, Noel JP (2000) A kaleidoscope of carotenoids. Nature Biotech. 18, 825- 826

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19. Jez JM, Ferrer J-L, Bowman ME, Dixon RA, Noel JP (2000) Dissection of malonyl-CoA decarboxylation from polyketide formation in the reaction mechanism of a plant polyketide synthase. Biochemistry 39, 890-902

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18. Ferrer J-L, Jez JM, Bowman ME, Dixon RA, Noel JP (1999) Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis. Nature Struct. Biol. 6, 775-784


 Graduate work (University of Pennsylvania, 1992-1998)

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17. Penning TM, Ma H, Jez JM (2001) Engineering steroid hormone specificity into aldo-keto reductases. Chem. Biol. Interact. 130-132, 659-671

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16. Jez JM, Penning TM (2001) The aldo-keto reductase superfamily: an update. Chem. Biol. Interact. 130-132, 499-525

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15. Penning TM, Burczynski ME, Jez JM, Lin H-K, Ma H, Moore M, Ratnam K, Palackal N (2001) Structure-function aspects and inhibitor design of type 5 17ß- hydroxysteroid dehydrogenase (AKR1C3). Mol. Cell. Endocrinol. 171, 137-149

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14. Penning TM, Burczynski ME, Jez JM, Hung C-F, Lin H-K, Ma H, Moore M, Palackal N, Ratnam K (2000) Human 3a-hydroxysteroid dehydrogenase isoforms (AKR1C1-1C4) of the aldo-keto reductase superfamily: functional plasticity and tissue distribution reveals roles in the inactivation and formation sex hormones. Biochem. J. 351, 67-77

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13. Jez JM, Penning TM (1998) Engineering steroid 5ß-reductase activity into rat liver 3a-hydroxysteroid dehydrogenase. Biochemistry 37, 9695-9703

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12. Schlegel BP, Jez JM, Penning TM (1998) Mutagenesis of 3a-hydroxysteroid dehydrogenase reveals a "push-pull" mechanism for proton transfer in aldo-keto reductases. Biochemistry 37, 3538-3548

 

11. Penning TM, Lin H-K, Jez JM, Ricigliano JW (1997) Inhibition of type 3 3a-hydroxysteroid dehydrogenase in Emerging Therapeutic Targets, Vol. 1: Oncologic, Endocrine, & Metabolic (A Ward, ed.) pp. 141-145, Ashley Publications Ltd., London

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10. Jez JM*, Lin H-K*, Schlegel BP, Peehl DM, Pachter JA, Penning TM (1997) Expression and characterization of recombinant type 2 3a-hydroxysteroid dehydrogenase from human prostate: Demonstration of bifunctional 3a/17ß-HSD activity and cellular distribution. Mol. Endocrinol. 11, 1971-1984 (*equal contribution)

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9. Jez JM, Flynn TG, Penning TM (1997) A new nomenclature for the aldo-keto reductase superfamily. Biochem. Pharmacol. 54, 639-647

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8. Jez JM, Bennett MJ, Schlegel BP, Lewis M, Penning TM (1997) Comparative anatomy of the aldo-keto reductase superfamily. Biochem. J. 326, 625-636

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7. Bennett MJ, Albert RH, Jez JM, Ma H, Penning TM, Lewis M (1997) Steroid recognition and regulation of hormone action: structure of testosterone and NADP+ bound to 3a-hydroxysteroid/dihydrodiol dehydrogenase. Structure 5, 799-812

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6. Penning TM, Bennett MJ, Smith-Hoog S, Schlegel BP, Jez JM, Lewis M (1997) Structure and function of rat 3a-hydroxysteroid dehydrogenase. Steroids 62, 101-111

 

5. Jez JM, Flynn TG, Penning TM (1996) A proposed nomenclature system for the aldo-keto reductase superfamily in Enzymology and Molecular Biology of Carbonyl Metabolism 6 (H Weiner, R Lindahl, DW Crabb, & TG Flynn, eds.) pp. 579-589, Plenum Press, New York

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4. Jez JM, Schlegel BP, Penning TM (1996) Characterization of the substrate binding pocket in rat liver 3a-hydroxysteroid/dihydrodiol dehydrogenase: the roles of tryptophans in ligand recognition and protein fluorescence. J. Biol. Chem. 271, 30190-30198

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3. Bennett MJ, Schlegel BP, Jez JM, Penning TM, Lewis M (1996) Structure of 3a-hydroxysteroid/dihydrodiol dehydrogenase complexed with NADP+. Biochemistry 35, 10702-10711

 

2. Penning TM, Pawlowski JE, Schlegel BP, Jez JM, Lin H-K, Hoog SS, Bennett MJ, Lewis M (1996) Mammalian 3a-hydroxysteroid dehydrogenases. Steroids 61, 508-523

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1. Jez JM, Vanderkooi JM, Laties AM (1996) Spectroscopic characterization of bendazac and benzydamine: possible photochemical modes of action. Biochem. Biophys. Res. Comm. 221, 266-270


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