#NEXUS [!Alignment of:] [Sequence Start End Sequencetype] [RANDOM (1 > 2760) DNA ] [CLCuMV-[62] (1 > 2751) DNA ] [CLCuMV-[26] (1 > 2751) DNA ] [CLCuMV-Fai2 (1 > 2750) DNA ] [CLCuMV-Fai1 (1 > 2747) DNA ] [CLCuMV-Mul (1 > 2725) DNA ] [CLCuMV-Ok (1 > 2725) DNA ] [OYVMV-201 (1 > 2739) DNA ] [OYVMFV-[Ind] (1 > 2741) DNA ] [OYVMFV-[301] (1 > 2741) DNA ] [CLCuLV-[802a] (1 > 2744) DNA ] [CLCuLV-[804a] (1 > 2744) DNA ] [ICMV (1 > 2815) DNA ] [ToLCMV (1 > 2744) DNA ] [PaLCV (1 > 2746) DNA ] [ToLCKV (1 > 2759) DNA ] [ToLCBDV (1 > 2761) DNA ] [CLCuFV-Fai (1 > 2750) DNA ] [CLCuFV-[72b] (1 > 2748) DNA ] [CLCuFV-[806b] (1 > 2748) DNA ] [ToLCBV (1 > 2749) DNA ] [ToLCBV-[Ban4] (1 > 2759) DNA ] [ToLCNdV-Mld (1 > 2739) DNA ] [ToLCNdV-[Luf] (1 > 2746) DNA ] [ToLCNdV-Svr (1 > 2739) DNA ] [ToLCNdV-[Lu] (1 > 2739) DNA ] [SLCCV (1 > 2741) DNA ] [TYLCTHV-[1] (1 > 2743) DNA ] [TYLCTHV-[2] (1 > 2751) DNA ] [TbLCCNV (1 > 2734) DNA ] [ToLCTWV (1 > 2739) DNA ] [PepLCV (1 > 2744) DNA ] [TbLCJV (1 > 2766) DNA ] [ToLCV-D1 (1 > 2766) DNA ] [ToLCV-A1 (1 > 2767) DNA ] [ToLCV (1 > 2766) DNA ] [AYVV (1 > 2741) DNA ] [ToLCLV (1 > 2748) DNA ] begin data; dimensions ntax=38 nchar=2935; format datatype=DNA interleave gap=- missing='.'; matrix [ 1 60] RANDOM -GATACTGCCCGGAGAAGACCTCAATA--TTTAGTATTCAGAGAAGTAAAGCAGAAAGCA CLCuMV-[62] TAATATTACCGGATGGCC-GCGC------------------------------GAT---- CLCuMV-[26] TAATATTACCGGATGGCC-GCGC------------------------------GAT---- CLCuMV-Fai2 TAATATTACCGGATGGCC-GCGC------------------------------GAT---- CLCuMV-Fai1 TAATATTACCGGATGGCC-GCGC------------------------------GAT---- CLCuMV-Mul TAATATTACCGGATGGCC-GCGC------------------------------GAT---- CLCuMV-Ok TAATATTACCGGATGGCC-GCGC------------------------------GAT---- OYVMV-201 TAATATTACCGGATGGCC-GCGC------------------------------GAT---- OYVMFV-[Ind] TAATATTACCGGATGGCC-GCGC------------------------------GAT---- OYVMFV-[301] TAATATTACCGGATGGCC-GCGC------------------------------GAT---- CLCuLV-[802a] TAATATTACCGGATGGCC-GCGC------------------------------GAT---- CLCuLV-[804a] TAATATTACCGGATGGCC-GCGC------------------------------GAT---- ICMV TAATATTACCGGATGGCC-GCGCCCCCCTCTTTATGGTGGTCCCCCCCACGTGGATGGCC ToLCMV TAATATTACCGGATGGCC-GCGA------------------------------TTT---- PaLCV TAATATTACCGGATGGCC-GCGA------------------------------TTT---- ToLCKV -------ACCGGATGGCC-GCGA------------------------------ATT---- ToLCBDV TAATATTACCGGATGGCC-GCGA------------------------------TTT---- CLCuFV-Fai TAATATTACCGGATGGCC-GCGC------------------------------GAT---- CLCuFV-[72b] TAATATTACCGGATGGCC-GCGC------------------------------GAT---- CLCuFV-[806b] TAATATTACCGGATGGCC-GCGC------------------------------GAT---- ToLCBV TAATATTACCGGATGGCC-GCGC------------------------------CTT---- ToLCBV-[Ban4] TAATATTACCGGATGGCC-GCGC------------------------------CTT---- ToLCNdV-Mld TAATATTACCGAATGGCC-GCGCAAATTTTT---AGGTGGGCCCT--------------- ToLCNdV-[Luf] TAATATTACCGAATGGCC-GCGCAAATTTTT---AGGTGGGCCCT--------------- ToLCNdV-Svr TAATATTACCGAATGGCC-GCGCAAATGTTT---AGGTGGGCCCT--------------- ToLCNdV-[Lu] TAATATTACCGAATGGCCCGCG-AAATTTTT---AGGTGGGCCCT--------------- SLCCV TAATATTACCGAATGGCC-GCGCGATTTTTTT--ATGTGGGCCCT--------------- TYLCTHV-[1] TAATATTACCGGATGGCC-GCG--ATTTTTTT-AAAGTGGTCCCCTTG------------ TYLCTHV-[2] TAATATTACCGGATGGCC-GCG--ATTTTTTT-AAAGTGGTCCCCTTG------------ TbLCCNV TAATATTACCGGATGGCC-GCGCGATTTTTTTTAAAGTGGTCCCCCCC------------ ToLCTWV TAATATTACCGGATGGCC-GCG--ATTTTTT---AAGTGGGTCCTACG------------ PepLCV TAATATTACCGGATGGCC-GCG--ATTTTTTTTCAAGTGGTCCCCCCG------------ TbLCJV TAATATTACCGGATGGCC-GC-CGATTTTTTTT---GTGGCCCCTCCC------------ ToLCV-D1 TAATATTACCGGATGGCC-GCGAAAAAAT----AAAGTGGTCCCCCTC------------ ToLCV-A1 TAATATTACCGGATGGCC-GCGAAAAAAT----AAAGTGGTCCCCCCC------------ ToLCV TAATATTACCGGATGGCC-GCGAAAAAAT----AAAGTGGTCCCCCCC------------ AYVV TAATATTACCGGATGGCC-GCG--ATTTTTTTAAA-GTGGTCCCCAC------------- ToLCLV TAATATTACCGGATGGCC-GCG--ATTTTTTTAAAAGTGGGCCCCCC------------- [ 61 120] RANDOM GGATTCTGCCCGGAGAAGGAAGCTCACATTAGTGAA--GCTCTTTTCACATTGAGGTCGT CLCuMV-[62] ---------TTTTTAT----G--------------------------------------T CLCuMV-[26] ---------TTTTTAT----G--------------------------------------T CLCuMV-Fai2 ---------TTTTTAT----G--------------------------------------T CLCuMV-Fai1 ---------TTTTTTT----G--------------------------------------T CLCuMV-Mul ---------TTTTTTT----G--------------------------------------T CLCuMV-Ok ---------TTTTTAT----G--------------------------------------T OYVMV-201 ---------TTTTTTTAGTGG--------------------------------------T OYVMFV-[Ind] ---------TTTTT-AAGTGG--------------------------------------T OYVMFV-[301] ---------TTTTTTAAGTGG--------------------------------------T CLCuLV-[802a] ---------TTTTTTTAGTGG--------------------------------------T CLCuLV-[804a] ---------TTTTTTTAGTGG--------------------------------------T ICMV GCGCCCCCCTCTTTATGGTGGTCCCCCCCACGTGGATGGCCGCGCCCCCCGCTTTATGGT ToLCMV ---------TTTTT---GTGG-----------------------------GCCCCTCAAC PaLCV ---------CTTTA---GTGG-----------------------------GCCC-TTAAC ToLCKV ---------TTTTT---GTGG-----------------------------GCCCCTCAAC ToLCBDV ---------TTTTTAACGTGG-----------------------------GCCCAACAAC CLCuFV-Fai ---------TTTTT--TGTGG-----------------------------GCCCTAC--- CLCuFV-[72b] ---------TTTTT--TGTGG-----------------------------GCCCTAC--- CLCuFV-[806b] ---------TTTTT--TGTGG-----------------------------GCCCTAC--- ToLCBV ---------TCT-----GT--------------------------------CACTATCAT ToLCBV-[Ban4] ---------TCT-----GT--------------------------------CACTTTAAT ToLCNdV-Mld ---------------------------CAAC-------------------------CAAT ToLCNdV-[Luf] ---------------------------CAAC-------------------------CAAT ToLCNdV-Svr ---------------------------CAAC-------------------------CAAT ToLCNdV-[Lu] ---------------------------GAAC-------------------------GAAT SLCCV ---------------------------CTAC-------------------------CAAT TYLCTHV-[1] ----------------------------A---TGTGAT---ATGTCATCCAATCAG-AA- TYLCTHV-[2] ----------------------------A---TGTGAT---ATGTCATCCAATCAG-AA- TbLCCNV ----------------------------A---TGTGCG---CGTTTGTCCAATAGA-AG- ToLCTWV ----------------------------CAC-TAATGT---TGGTCGGCCAATAGA-AA- PepLCV --------------------------------CGTGCG---CTG--GACCAATCAT-AA- TbLCJV ----------------------------TGT-CGGCTG---ATCCTGACCGTTCCT-CA- ToLCV-D1 -----------------------------ACGTGAATG---ATGTCGACTGGTCGACGA- ToLCV-A1 -----------------------------ACGTGATTG---ATGTTGACTGGTCGACGA- ToLCV ----------------------------CACGTGATTG---ATGT-GACCTGTCGACGA- AYVV ----------------------------CAC-TAACAA---AAATCCCCCACTCAC-AA- ToLCLV ----------------------------CAC-TAAAAT---ATGTCCCCCACTCAG-AA- [ 121 180] RANDOM GTACTGTTCGTTTTTTAACCCACGTCC--CAAATTTTTCCGTTGGAACTCTTCGAGATCT CLCuMV-[62] GGGCCCCC-------GAGTT--------ATGAGATTGCTCCCTCAAAGCT-AAATAACGC CLCuMV-[26] GGGCCCCC-------GAGTT--------ATGAGATTGCTCCCTCAAAGCT-AAATAACGC CLCuMV-Fai2 GGGCCCCC-------GAGTT--------ATGAGATTGCTCCCTCAAAGCT-AAATAACGC CLCuMV-Fai1 GGGCCCCC-------GATTT--------ATGAGATTGCTCCCTCAAAGCT-AAATAACGC CLCuMV-Mul GGGCCCCC-------GATTT--------ATGAGATTGCTCCCTCAAAGCT-AAATAACGC CLCuMV-Ok GGGCCCCC-------GATGT--------ATGAGATTGCTCCCTCAAAGCT-AAATAACGC OYVMV-201 GGGTCCAG-------AACGC--------ACGACGATGCAGACTCAAAGCTTAGATAACGC OYVMFV-[Ind] GGGTCCAG-------AACGC--------ACGACGATGCAGACTCAAAGCTTAGATAACGC OYVMFV-[301] GGGTCCAG-------AACGC--------ACGACGATGCAGACTCAAAGCTTAGATAACGC CLCuLV-[802a] GGGTCCAG-------AACGC--------ACGACGATGCAGACTCAAAGCTTAGATAACGC CLCuLV-[804a] GGGTCCAG-------AACGC--------ACGACGATGCAGACTCAAAGCTTAGATAACGC ICMV GGCCCCCCCCACGTGGAGATGTCCCCCACTCAGAACGCTCGCTCAAAGCTTGTATA-TGT ToLCMV GCACTAACTGACAAGGACATGCTAACCAATCACATGACGCGCTCAAAGCTTAATTG-TTT PaLCV GCATTAACTGACAAGGACATGCGAACCAATCATATGACACGCTCAAAGCCTAATTG-TTT ToLCKV GCACTAACTGACAAGGACATGCTAACCAATCACATGACGCGCTCAAAGCTTAATTG-TTT ToLCBDV AAGTGTGATGACAAAGACCTGTTGACCAATGAAAATTGTCCCTCAAAGCTTAATTG-TGT CLCuFV-Fai -CATTAACT--------CTTGTCGGCCAATCATATGACGCGCTCAAAGCTTAAATAATTC CLCuFV-[72b] -CATTAACT--------CTTGTCGGCCAATCATATGACGCGCTCAAAGCTTAAATAATTC CLCuFV-[806b] -CATTAACT--------CTTGTCGGCCAATCATATGACGCGCTCAAAGCTTAAATAATTC ToLCBV GGTCCCCTCCACTAAATCATTTCCACCAATCATATGTCACGCTGAAAGCTTAATTATTTA ToLCBV-[Ban4] GGTCCCCCCCACTAAATAATGTCTGCCAATCATATGCCTTCCTGAAAGCTTAAATATTTA ToLCNdV-Mld G-------------AAATTCAC------GCTACATGGCCTATTTAGTGCGTGGGGA---- ToLCNdV-[Luf] G-------------AAATGCAC------GCTACAATGCTTCTTTAGTGCGTGGGGA---- ToLCNdV-Svr G-------------AAATTCAC------GCTACATGGCCTATTTAGTGCGTGGGGA---- ToLCNdV-[Lu] G-------------AAAATCAT------GCTACATGGCCTATTTAGTGCGTGGGTA---- SLCCV G-------------AAATTCAC------GCTACATGGCTTATTTATTACGTGGGGA---- TYLCTHV-[1] -CACTCTTTGA----AAGCC--T------------------------AATTATTTA-TGG TYLCTHV-[2] -CACTCTTTGA----AAGCC--T------------------------AATTATTTA-TGG TbLCCNV GCGCTCCTC-A----AAGCT--T------------------------ATTTATTAAATGG ToLCTWV -CGCTCCCTCA----AAGCT--T------------------------ATTTACAAAAATA PepLCV CCATCCCTC-A----AAGCT--T------------------------GCATGCCTGCAGG TbLCJV ACGCTTAATTA----AATAC--T------------------------GGTCCCCGTACGT ToLCV-D1 ATGAGAATCGC----GCGTCATC------------------------GCTTATTTAAGTT ToLCV-A1 ATGAGAACCGC----GCCTCATC------------------------GCTTAGATAATTA ToLCV ATGAGAACCGC----GCGTCATC------------------------GCTTATTTAAGTT AYVV -CGCTCCCTCA----AAGTT--A------------------------AATTATTACGTGG ToLCLV -CGCGCCCTCA----GAGCC--T------------------------ATTTAGTGTGTGG [ 181 240] RANDOM TTTTGCTGAATAAGATGTGCTAACTAATAGAAAACCCATAAGCCCCGGCCTTTACGGGCC CLCuMV-[62] TCCCGCCCACTAT-AAGTACTTGCGCACTAAGTTTT--CAAATTCAAACATGTG-GGATC CLCuMV-[26] TCCCGCCCACTAT-AAGTACTTGCGCACTAAGTTTT--CAAATTCAAACATGTG-GGATC CLCuMV-Fai2 TCCCGCCCACTAT-AAGTACTTGCGCACTAAGTTT---CAAATTCAAACATGTG-GGATC CLCuMV-Fai1 TCCCGCACACTAT-AAGTACTTGCGCACTAAGTTT---CAAATTCAAACATGTG-GGATC CLCuMV-Mul TCCCGCACACTAT-AAGTACTTGCGCACTAAGTTT---CAAATTCAAACATGTG-GGATC CLCuMV-Ok TCCCGCCCACTAT-AAGTACTTGCGCACTAAGTTT---CAAATTCAAACATGTG-GGATC OYVMV-201 TTCT-TTGGCTAT-AAGTACTTGCGCACTAAGTTT---AAATTCAAAACATGTG-GGATC OYVMFV-[Ind] TCCT-TCGGCTAT-AAGTACGTGCGCACTAAGTTT---CAATTCAAAAAATGTG-GGATC OYVMFV-[301] TCCT-TCGGCTAT-AAGTACTTGCGCACTAAGTTT---CAAATTGAAACATGTG-GGATC CLCuLV-[802a] TCCT-TCGGCTAT-AAGTACTTGCGCACTAAGTTT---CAAATTGAAACATGTG-GGATC CLCuLV-[804a] TCCT-TCGGCTAT-AAGTACTTGCGCACTAAGTTT---CAAATTGAAATATGTG-GGATC ICMV GTGGTCCCCCTTT-AAGTACTTGGGCAACAAGT--CGTTGC-CTGTACAATGTG-GGACC ToLCMV TGTGGTCCCCTAT-TTAAACTTCGGCACCAAGTATTGT-ATTTTGCACTATGTG-GGATC PaLCV TTTGGTCCCTTAT-TTAAACTTCGTCCCCAAGTATTTT-CTTTTGCACTATGTG-GGATC ToLCKV TGTGGTCCCCTAT-TTAAACTTCGGCACCAAGTATTGT-ATTTTGCACTATGTG-GGATC ToLCBDV CCTGGTCCCCTCT-ATAAACTTGGTCCCCAAGT-TCCC-ACATTACAAAATGTG-GGATC CLCuFV-Fai TCCCGCTTATTAT-AAGTACTTCGTTGCTAAGTAT-GC-GT-TTGAAAAATGTG-GGATC CLCuFV-[72b] TCCCGCTTATTAT-AAGTACTTCGTTGCTAAGTAT-GC-GT-TTGAAAAATGTG-GGATC CLCuFV-[806b] TCCCGCTTATTAT-AAGTACTTCGTTGCTAAGTAT-GC-GT-TTGAAAAATGTG-GGATC ToLCBV TTTTTGTCCTTAT-ATAAACTTAGTCGCCAAGTTTTACCATTAAATAAAATGTG-GGATC ToLCBV-[Ban4] TTTTTGTCATTAT-ATAAACTTAGTCACCAAGTTTTACCATTATTTAAAATGTG-GGATC ToLCNdV-Mld ------CCAATAA-ATAGACTTGCTCACCAAGTTTGGATCCAC--AAACATGTG-GGATC ToLCNdV-[Luf] ------CCATTAA-ATAGACTTGCTCACCAAGTTTGGATCCAC--AAACATGTG-GGATC ToLCNdV-Svr ------TCAATAA-ATAGACTTGCTCACCAAGTTTGGATCCAC--AAACATGTG-GGATC ToLCNdV-[Lu] ------CCAATAA-ATAGACTTGCTCACCAAGTTTGGATCCAC--AAACATGTG-GGATC SLCCV ------CCATTAA-ATAGACTTCCGCACCAAGTTTTGATCCAC--AA-CATGTG-GGATC TYLCTHV-[1] TCCC-C--TATTT-AAG-ACTTAGTCCCCAAGTTTCGGCGAAATTCAAAATGTG-GGATC TYLCTHV-[2] TCCC-C--TATTT-AAG-ACTTAGTCCCCAAGTTTCGGCGAAATTCAAAATGTG-G-ATC TbLCCNV TCCC-C--TAT---AAA-ACGTAGCTCCCAAGTATATACG---TTAAACATGTG-GGATC ToLCTWV CCCG-T--TATAA-ATA--CTTGGTGGCTAAGTTAC-AATCAGT--AAAATGTG-GGATC PepLCV TTAT-C--CCATC-AAA-ACGTGGTCCCCAAGTACTTACATCA--AAACATGTG-GGATC TbLCJV CTTT-AAGTATTT-AAT-ACTTGCGCCCTAAGCTTTA--TACGTGTATAATGTG-GGATC ToLCV-D1 TTTTGTCTTATAT-ATA--CTTGGGCCCTAAGTATTTAGGCT-TA-AAAATGTG-GGATC ToLCV-A1 TTTTGTCGTATAT-ATG--CTTGGGCCCTAAGTATTTAGGCC-CATAAAATGTG-GGATC ToLCV TTTTGTCGTATAT-ATA--CTTGGGCCCTAAGTATTTAGGCC-CATAAAATGTG-GGATC AYVV TCCC-C--TATTT-ATA--CGTAGTCTCCAAGTATT-ATTTTA---AACATGTG-GGATC ToLCLV TCCC-C--TATTT-ATA-TCTTGGTGACCAAGTTTC-ATTTCA---AACATGTG-GGACC [ 241 300] RANDOM CATGGGTGAACGGCCTT-------AACCTTTA---GGTCTGCGATTATA-ACTTCCCTC- CLCuMV-[62] CATTGTTAAACGAA-TTTCCTGATA-CGGTG-CACGGGTTTCGG-TGTATGCTTTCTGTG CLCuMV-[26] CATTGTTAAACGAA-TTTCCTGATA-CGGTG-CACGGGTTTCGG-TGTATGCTTTCTGTG CLCuMV-Fai2 CATTGTTAAACGAA-TTTCCTGATA-CGGTG-CACGGGTTTCGG-TGTATGCTTTCTGTG CLCuMV-Fai1 CACTATTAAACGAA-TTCCCTGATA-CGGTT-CACGGGTTTCGG-TGTATGCTTTCTGTG CLCuMV-Mul CACTATTAAACGAA-TTCCCTGATA-CGGTT-CACGGGTTTCGG-TGTATGCTTTCTGTG CLCuMV-Ok CATTGTTAAACGAA-TTCCCTGATA-CGGTG-CACGGGTTTCGG-TGTATGCTTTCTGTT OYVMV-201 CACTAGTAAACGAG-TTCCCGGATA-CGGTT-CACGGGTTTCGT-TGTATGCTATCTGTA OYVMFV-[Ind] CACTATTAAACGAA-TTTCCGGATA-CGGTT-CACGGGTTTCGT-TGTATGCTATCTCTA OYVMFV-[301] CACTAGTAAACGAA-TTCCCGGATA-CGGTG-CACAGGTTTCGT-TGTATGCTATCTGTC CLCuLV-[802a] CACTAGTAAACGAA-TTCCCGGATA-CGGTG-CACGGGTTTCGT-TGTATGCTTTCTGTC CLCuLV-[804a] CACTAGTAAACGAA-TTCCCGGATA-CGGTG-CACGGGTTTCGT-TGTATGCATTCTGTC ICMV CTTTACTAAACGAG-TTCCCTGAGT-CTGTC-CACGGTTTCCGG-TGTATGCTCGCCGTG ToLCMV CATTGTTAAACGAG-TTTCCTGAAA-CCGTT-CACGGTTTTAGA-TGTATGTTAGCAGTT PaLCV CATTGTTGAACGAG-TTTCCCGAAA-CCGTC-CACGGTTTTATA-TGTATGTTAGCAGTT ToLCKV CATTGTTAAACGAG-TTTCCTGAAA-CCGTT-CACGGTTTTAGA-TGTATGTTAGCAGTT ToLCBDV CTTTAGTAAACGAG-TTTCCCGAAA-CCGTT-CACGGTTTTAGA-TGTATGTTAGCAGTT CLCuFV-Fai CACTGTTAAATGAG-TTCCCCGACA-CCGTT-CACGGTTTTAGG-TGTATGTTAGCAGTT CLCuFV-[72b] CACTGTTAAATGAG-TTCCCCGACA-CCGTT-CACGGTTTTAGG-TGTATGTTAGCAGTT CLCuFV-[806b] CACTGTTAAATGAG-TTCCCCGACA-CCGTT-CACGGTTTTAGG-TGTATGTTAGCAGTT ToLCBV CACTTACAAATGAT-TTTCCCGAAA-CCGTA-CACGGATTCAGG-TGTATGCTTGCTATA ToLCBV-[Ban4] CACTTTTAAATGAT-TTTCCGGAAA-CCGTA-CACGGATTCAGG-TGTATGCTTGCTATA ToLCNdV-Mld CATTGTTGGACGAA-TTTCCAGAAAGC-GTT-CATGG-TCTAAGGTGCATGCTAGCTGTA ToLCNdV-[Luf] CATTATTGCACGAA-TTTCCAGAAAGC-GTT-CATGG-TCTAAGGTGCATGCTAGCTGTA ToLCNdV-Svr CATTATTGCACGAA-TTTCCCGAAAGC-GTT-CATGG-TCTAAGGTGCATGCTAGCTGTA ToLCNdV-[Lu] CATTGTTGCACGAA-TTTCCAGAAAGC-GTT-CATGG-TCTAAGGTGCATGCTAGCTGTA SLCCV CACTTATGCACGAA-TTTCCTGAAAGC-GTT-CATGG-TCTAAGGTGCATGCTAGCGGTG TYLCTHV-[1] CACTACTAAACGAA-TTTCCAGAAAAC-GTC-CACGGTTTCC-GTTGTATGTTAGCGGTG TYLCTHV-[2] CACTACTAAACGAA-TTTCCAGAAAAC-GTC-CACGGTTTCC-GTTGTATGTTAGCGGTG TbLCCNV CATTGCTTAATGAG-TTTCCTGAAACC-GTG-CACGGTTTTA-GGTGCATGTTAGCAATT ToLCTWV CACTTTTAAATGA-TTTTCCGGAGT-CTGTG-CATGGTCTACGG-TGTATGCTTGCCATT PepLCV CTTTACTAAACGAAGTTTCCTGAAAACCGTAACATGGTTTTAAGGTGTATGTTAGCAATT TbLCJV CATTAGTTAACGA-GTTCCCTGAAA-CCGT-ACACGGTTTTAGG-TGTATGCTTGCAATT ToLCV-D1 CTTTAGTCCACGAA-TTTCCTGAAA-CCGTT-CACGGTTTCCG-TTGTATGCTCGCCAAC ToLCV-A1 CTTTAGTCCACGAA-TTTCCTAAAA-CCGTT-CACGGTTTCCG-TTGTATGCTCGCCAAC ToLCV CTTTAGTCCACGAA-TTTCCTGAAA-CCGTT-CACGGTTTCCG-TTGTATGCTCGCCAAC AYVV CTCTTTTGAACGA-GTTTCCTGAAA-CTGTT-CACGGTTTTAGG-TGTATGCTTGCCGTA ToLCLV CACTTTTGAACGA-GTTCCCTGAGA-CTGTT-CATGGTCTACGG-TGTATGCTAGCCAAA [ 301 360] RANDOM ---TATTGAAAATCCCACCACATTAGTGAA-GCTCTTTT---CACA-TTGAGGTCGTGGG CLCuMV-[62] AAATATCTGCAACTTT-TATCGCA--GGATTATTC-ACCGGATACC-CTAGGTTAC-GAG CLCuMV-[26] AAATATCTGCAACTTT-TATCTCA--GGATTATTC-ACCGGATACC-CTAGGTTAC-GAG CLCuMV-Fai2 AAATATCTGCAACTTT-TATCGCA--GGATTATTC-ACCGGATACC-CTAGGTTAC-GAG CLCuMV-Fai1 AAATATTTGCAACTTT-TGTCGCA--GGATTATTC-ACCGGATACG-CTTGGGTAC-GAG CLCuMV-Mul AAATATTTGCAACTTT-TGTCGCA--GGATTATTC-ACCGGATACG-CTTGGGTAC-GAG CLCuMV-Ok AAATATCTGCAACTTT-TATCGCA--GGATTATTC-ACCGGATACC-CTAGGTTAC-GAG OYVMV-201 AAATATTTGCAACTTT-TGTCGCA--GGATTATTC-TCCAGATACT-CTTGGGTAC-GAG OYVMFV-[Ind] AAATATTTGCAACTTT-TGTCGCA--GGATTATTC-TCCAGATACG-CTTGGGTAC-GAG OYVMFV-[301] AAATATTTGCAACTTT-TGTCGCA--GGATTATTC-TCCAGATACT-CTTGGGTAC-GAG CLCuLV-[802a] AAATATTTGCAACTTT-TGTCGCA--GGATTATTC-TCCAGATACC-CTTGGTTAC-GAG CLCuLV-[804a] AAATATTTGCAACTTT-TGTCGCA--GGATTATTC-TCCAGATACC-CTTGGTTAC-GAG ICMV AAATACCTTCAGCTGG-TTGAATG--TACTTATTC-TCCTGATACA-CTCGGTTAC-GAT ToLCMV AAATATCTGCAATTAG-TAGAAAA--GACCTATTC-TCCCGACACA-TTAGGTTAC-GAT PaLCV AAATATCTGCAGTTAT-TAAAAAA--GACTTATTC-TCCTGACACA-TTAGGTTAC-GAT ToLCKV AAATATCTGCAATTAG-TAGAAAA--GACCTATTC-TCCCGACACA-TTAGGTTAC-GAT ToLCBDV AAATATCTTCAGTTAG-TAGAAAA--GACTTATTC-TCCCGACACA-TTAGGGTAC-GAT CLCuFV-Fai AAATATTTGCAGTTAG-TACAGAA--AACTTACTC-TCCTGATACA-TTGGGTTAC-GAT CLCuFV-[72b] AAATATTTGCAGTTAG-TAGAGAA--AACTTACTC-TCCTGATACA-TTGGGTTAC-GAT CLCuFV-[806b] AAATATTTGCAGTTAG-TAGAGAA--AACTTACTC-TCCTGATACA-TTGGGTTAC-GAT ToLCBV AAATACTTGCAGTTGG-TAGAAAA--TACGTATTC-CCCCGATTCT-TTGGGATAC-GAT ToLCBV-[Ban4] AAATACCTGCAGTTGG-TAGAAAA--TACGTATTC-CCCCGATTCG-TTGGGATAC-GAC ToLCNdV-Mld AAATATCTCCAA-GAGATAGAAAA--GAACTATTCCCC-AGACACAGT-CGGGTAC-GAT ToLCNdV-[Luf] AAATATCTGCACCGAGATAGGAAAAGGAACTATTCCCCCAGACACAGTTCGGCTACCGAT ToLCNdV-Svr AAATATCTCCAA-GAGATAGAAAA--GAACTATTCACC-AGACACAGT-CGGCTAC-GAT ToLCNdV-[Lu] AAATATCTCCAA-GAGATAGAAAA--GAACTACTCCCC-AGACACAGT-CGGCTAC-GAT SLCCV AAATATCTTCAG-GAGGTGGAAAAAACA--TATTC-TCCGGACACAGT-CGGCTAC-GAT TYLCTHV-[1] AAGTATCTGCAAGCGG-TCGAGAA--GACTTATTC-CCCTGATACT-CTAGGGTTT-GAT TYLCTHV-[2] AAGTATCTGCAAGCGG-TCGAGAA--GACTTATTC-CCCTGATACT-CTAGGGTTT-GAT TbLCCNV AAGTATTTGCAGTTAG-TCGAAAA--TACATACTC-CCCCGATACA-TTAGGTTAC-GAT ToLCTWV AAGTATCTACATTTTG-TAGAAAA--TACATATTC-CCCGGATACT-TTGGGTTAC-GAT PepLCV AAGTATTTGCAACTAG-TAGAGAA--TACATACTC-TCCTGATACA-TTAGGCTAC-GAC TbLCJV AAATACCTACAGCTTG-TAGAATC--TACGTATTC-TCCAGATACG-GTAGGTCGC-GAT ToLCV-D1 AAATATTTATTGGCTA-TTGAATC--AAAATACGC-TCCGGATACA-TTGGGCTAC-GAA ToLCV-A1 AAATATTTGTTGGCTG-TTGAATC--AAAATACGC-TCCGGATACA-TTGGGTTAC-GAA ToLCV AAATATTTGTTGGCTG-TTGAATC--AAAATACGC-TCCGGATACA-TTGGGATAC-GAA AYVV AAATATCTTCAATTAG-TTGAACA--GACTTACTC-TCCTGATACG-ATTGGGCAC-GAT ToLCLV AAATACGTACAGGAAG-TTCAGAA--GACGTATTC-TCCGGATACG-GTTGGGTAC-GAT [ 361 420] RANDOM CCCATGGGTGAAC-GGCCTTAACCTTTAGGTCT---ATTGAGGTC---GTGGTTCGC--- CLCuMV-[62] TTAATACGGGATTTAATCTGTATTCTACGTTCCCGTAATTATGTCGAAGCGAGCTGCAGA CLCuMV-[26] TTAATACGGGATTTAATCTGTATTCTACGTTCCCGTAATTATGTCGAAGCGAGCTGCAGA CLCuMV-Fai2 TTAATACGGGATTTAATCTGTATTCTACGTTCCCGTAATTATGTCGAAGCGAGCTGCAGA CLCuMV-Fai1 TTAATACGGGATTTAATTTGTATTTTACGCTCCCGTAATTATGTCGAAGCGAGCTGCCGA CLCuMV-Mul TTAATACGGGATTTAATTTGTATTTTACGCTCCCGTAATTATGTCGAAGCGAGCTGCCGA CLCuMV-Ok TTAATACGGGATTTAATCTGTATTCTACGTTCCCGTAATTATGTCGAAGCGAGCTGCAGA OYVMV-201 TTAATACGGGATTTAATTTGTATTTTACGCTCCCGTAATTATGTCGAAGCGAGCTGCCGA OYVMFV-[Ind] TTAATACGGGATTTAATTTGTATTTTACGTTCCCGTAATTATGTCGAAGCGAGCTGCCGA OYVMFV-[301] TTAATACGGGATTTAATTTGTATTTTACGCTCCCGTAATTATGTCGAAGCGAGCTGCCGA CLCuLV-[802a] TTAATACGTGATTTAATCTGTATTCTACGCTCCCGTAATTATGTCGAAGCGAGCTGCCGA CLCuLV-[804a] TTAATACGTGATTTAATCTGTATTCTACGCTCCCGTAATTATGTCGAAGCGAGCTGCCGA ICMV TTAATTAGAGATTTGTTCTCTGTTATTAGGGCGAAGAATTATGTCGAAGCGACCAGCAGA ToLCMV TTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGA PaLCV TTATTTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGA ToLCKV TTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGA ToLCBDV TTAATTAGGGATTTAATTTCAGTCATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGA CLCuFV-Fai TTGATAAGGGATTTAATCCTGGTAATAAGGGCTAGGAATTATGTCGAAGCGACCAGCAGA CLCuFV-[72b] TTGATAAGGGATTTAATCCTGGTAATAAGGGCTAGGAATTATGTCGAAGCGACCAGCAGA CLCuFV-[806b] TTGATAAGGGATTTAATCCTGGTAATAAGGGCTAGGAATTATGTCGAAGCGACCAGCAGA ToLCBV CTAATACGTGATTTAATTTCTGTCGTCAGGGCTAAAAGCTATGTCCAAGCGTCCGGCAGA ToLCBV-[Ban4] CTAATACGTGATTTAATTTCTGTCGTCAGGGCTAAAAGCTATGTCCAAGCGTCCAGCAGA ToLCNdV-Mld CTTGTCCGAGATCTCATTCTTGTTCTCCGAGCAAAGAACTATGGCGAAGCGACCAGCAGA ToLCNdV-[Luf] CTTGTCCGAGATCTCATCCTTGTCCTTCGAGCGAAGAACTATGGCGAAGCGACCAGCAGA ToLCNdV-Svr CTTATTCGAGATCTCATTCTTGTTCTCCGAGCAAAGAACTATGGCGAAGCGACCAGCAGA ToLCNdV-[Lu] CTTGTCCGAGATCTCATTCTTGTTCTCCGAGCAAAGAACTATGGCGAAGCGACCAGCAGA SLCCV CTTGTCCGCGATCTCATTCTTGTTCTCCGCGCAAAGAACTATGTCGAAGCGACCAGCCGA TYLCTHV-[1] CTCATCCGTGATCTCATCGGTGTAATTCGTGCGAAGAACTATGTCGAAGCGTCCAGCAGA TYLCTHV-[2] CTCATCCGTGATCTCATCGGTGTAATTCGTGCGAAGAACTATGTCGAAGCGTCCAGCAGA TbLCCNV TTAATTCGTGATTTAATTTCAGTTATTCGTGCTAGAGATTATGGCGAAACGTCCCGCCGA ToLCTWV CTCATACGTGATTTGATTTTAGTTATCCGTGCTAGAGATTATGTCGAAGCGACCCGCCGA PepLCV CTAATACGTGATCTCATCTTGGTTATTCGTGCTAGGGATTATGTCGAAGCGTCCCGCAGA TbLCJV CTTATTCGTGACCTAATACTTGTTATTCGTGCTAAGAATTATGTCGAAGCGTCCTGCAGA ToLCV-D1 TTGATCAGGGATTGCATTGGGGTTGTTAGGTCTCGAAATTATGAGCAAGCGACCAGCAGA ToLCV-A1 TTGATCAGGGATTGCATTGGGGTTGTTAGGTCTCGAAATTATGAGCAAGCGACCAGCAGA ToLCV TTGATCAGGGATTGCATTGGGGTTGTTAGGTCTCGAAATTATGAGCAAGCGACCAGCAGA AYVV CTTATACGCGATTTAATTTCAGTAATTCGTGCTCGCAATTATGTCGAAGCGTCCCGCAGA ToLCLV TTATTTTGTGATTTAATACATCTCTTAAACACTAAAAATTATGAGCAAGCGTCCAGCAGA [ 421 480] RANDOM TATGTTTATT---ACACTTGGATTGGAAGGCTGAAGGTATATGGGTATAAATAATGCGGT CLCuMV-[62] TATCGTCATTTCTACGCCCGCGTCGAAAGTACGTCGGCGTCTGAACTTCGGCAGCCCATA CLCuMV-[26] TATCGTCATTTCTACGCCCGCGTCGAAAGTACGTCGGCGTCTGAACTTCGGCAGCCCATA CLCuMV-Fai2 TATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATA CLCuMV-Fai1 TATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATA CLCuMV-Mul TATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATA CLCuMV-Ok TATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATA OYVMV-201 TATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATA OYVMFV-[Ind] TATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATA OYVMFV-[301] TATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCTTA CLCuLV-[802a] TATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATA CLCuLV-[804a] TATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATA ICMV TATCATAATTTCTACTCCAGGCTCGAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATA ToLCMV TATAATCATTTCCACTCCCGCTTCGAAGGTACGTCGCCGTCTCAACTTCGACAGCCCATA PaLCV TATATTCATTTCCACGCCCGCTTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCGTA ToLCKV TATAATCATTTCCACTCCCGCTTCGAAGGTACGTCGCCGTCTCAACTTCGACAGCCCATA ToLCBDV TATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATA CLCuFV-Fai TATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATA CLCuFV-[72b] TATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATA CLCuFV-[806b] TATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATA ToLCBV TATGATCATTTCCGGGCCCGTCTCGAAGTATCGCCGACTTCTGAGCTCAATCAGCCCATA ToLCBV-[Ban4] TATGATCATTTCCGGTCCCGTCTCGAAGTATCGCCGACTTCTGAGCTCAATCAGCCCATA ToLCNdV-Mld TATCATCATTTCAACGCCCGCATCGAAGGTACGCCGACGTCTCAACTTCGACAGCCCCTA ToLCNdV-[Luf] TATCATCATTTCAACGCCCGCATCGAAGGTACGCCGACGTCTCAACTTCGACAGCCCCTA ToLCNdV-Svr TATCATCATTTCAACGCCCGCATCGAAGGTACGCCGACGTCTCAACTTCGACAGCCCCTA ToLCNdV-[Lu] TATCATCATTTCAACGCCCGCATCGAAGGTTCGCCGACGTCTCAACTTCGACAGCCCCTA SLCCV TATTATCATTTCAACTCCCGCGTCGAAGGTACGCCGACGTCTCAACTTCGACAGCCCATA TYLCTHV-[1] TATTCTCATTTCCACTCCCGTCTCGAAAGTACGTCGCCGTCTGAACTTCGACAGCCCATA TYLCTHV-[2] TATTCTCATTTCCACTCCCGTCTCGAAAGTACGTCGCCGTCTGAACTTCGACAGCCCATA TbLCCNV TATTGTCATTTCCACTCCCGCCTCGAAGGTGCGTCGCCGGCTGAACTTCGACAGCCCCTA ToLCTWV TATAGTCATTTCCACTCCCGCTTCCAAGGTTCGTCGCCGTCTGAACTTCGCCAGCCCATA PepLCV TATAGTCATTTCCACTCCCGCCTCCAAGGTGCGTCGCCGTTTGAACTTCGACAGCCCATA TbLCJV TATAGTGATTTCCACACCCGCCTCCAAGGTACGTCGCCGTCTGAACTTCGACAGCCCGTA ToLCV-D1 TATCGTGATATCTACACCCGCCTCCAAGGTGCGACGGAAGCTGAACTTCAACAGTCCGTT ToLCV-A1 TATCGTGATATCTACACCCGCCTCCAAGGTGCGACGGAAGCTGAACTTCAACAGTCCGTT ToLCV TATCGTGATATCTACACCCGCCTCCAAGGTGCGACGGAAGCTGAACTTCAACAGTCCGTT AYVV TATTGTCATTTCCACTCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACACCCCCGT ToLCLV TATAGTCATTTCTACTCCCGCCTCCAAGGTACGCCGCCGTCTGAACTTCGACACCCCTTA [ 481 540] RANDOM CAGTAGTTCGGATCTAGCACC--TTGAGAACTCTTGGAGAGGATCATGGCTACGGGTCAG CLCuMV-[62] CACCAACCGTGTTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA CLCuMV-[26] CACCAACCGTGTTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA CLCuMV-Fai2 CACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA CLCuMV-Fai1 CACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA CLCuMV-Mul CACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA CLCuMV-Ok CACCAACCGTGTTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA OYVMV-201 CACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA OYVMFV-[Ind] CACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA OYVMFV-[301] CACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA CLCuLV-[802a] CACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA CLCuLV-[804a] CACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAA---ACAACAGGCATGGACAAA ICMV CAGCAGCCGTGCGGCTGTCCCTACTGTCCGCGTCACAAA---AAGACAATCCTGGACAAA ToLCMV TGTGAGCCGTGCTGTTGCCCCCATTGTCCGCGTCACCAA---AGCAAAAGCATGGGCGAA PaLCV TGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAA---AGCAAAAGCATGGGCGAA ToLCKV TGTGAGCCGTGCTGTTGCCCCCATTGTCCGCGTCACCAA---AGCAAAAGCATGGGCGAA ToLCBDV TGCGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAA---AGCAAGAGCATGGGCCAA CLCuFV-Fai TGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAA---AGCAAAAGCATGGGCGAA CLCuFV-[72b] TGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAA---AGCAAAAGCATGGGCGAA CLCuFV-[806b] TGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAA---AGCAAAAGCATGGGCGAA ToLCBV CAGCAAGCGTGCTGCTGTCCGCATTGTCCGCGGCACAAA---GGGAAAGGAATGGGCCAA ToLCBV-[Ban4] CAGCAAGCGTGCTGCTGTCCGCATTGTCCGCGCCACAAA---GGGAAAGGAATGGGCCAA ToLCNdV-Mld TGGAGCTCGTGCAGTTGTCCCCATTGCCCGCGTCACAAA---AGCAAAGGCCTGGACCAA ToLCNdV-[Luf] TGGAACTCGTGCAGTTGTCCCCATTGCCCGCGTCACAAA---AGCAAAGGCCTGGACCAA ToLCNdV-Svr TGGAGCTCGTGCAGTTGTCCCCATTGCCCGCGTCACCAA---AGCAAAGGCCTGGACCAA ToLCNdV-[Lu] TGGAGCTCGTGCAGTTGTCCCCATTGCCCGCGTCACAAA---AGCAAAGGCCTGGACAAA SLCCV TGTTTCCCGTGCAGTTGTCCCCATTGCCCGCGTCACAAA---GGGAAAGGCCTGGACAAA TYLCTHV-[1] CAACAGCCGTGCTGCTGTCCCCACTGTCCGCGTCACAAA--AGGGCAGGT-ATGGAAGAA TYLCTHV-[2] CAACAGCCGTGCTGCTGTCCCCACTGTCCGCGTCACAAA--AGGGCAGGT-ATGGAAGAA TbLCCNV TACGGGTCGTGTTGCTGCCCCCACTGTCCGCGTCACCAG--AAGACAAAT-GTGGTCAAA ToLCTWV TGGCAACCGTGTAGCTGCCCCCACTGTCCTCGTCACAAACAAAAAGAGTTCATGGGTGAA PepLCV TGTCAGCCGTGCTGCTGCCCCTACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGCCAA TbLCJV TGTCAGCCGTGCGAATGCCCCCACTGTCCTCGTCACAAACAGAAGGAGATCATGGGCTCA ToLCV-D1 CAAGAGCGCTGCTGCTGTCCCCACTGTCCGCGTCACAA---GAAGGCGGACATGGGTGAA ToLCV-A1 CAAGAGCGCTGCTGCTGTCCCCACTGTCCGCGTCACAA---GAAGGCGGACATGGGTGAA ToLCV CAAGAGCGCTGCTGCTGTCCCCACTGTCCGCGTCACAA---GAAGGCGGACATGGGTGAA AYVV GATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAGAAGAAGGACATGGACCAA ToLCLV TACCAGTCGTGCTGCTGTCCCCACTGTCCTCGTCACAAACAAAAGACGAGCATGGATTCA [ 541 600] RANDOM TAAGCGACTATGGGGTGGGT---AGTTCTA-GAACTGCATTCAACTCC-GCTATGGTTAA CLCuMV-[62] CAGGCCTATGAACAGGAAGCCCAGAATGTATCGGATGTACAGAAGTCCGGATGTTCCAAG CLCuMV-[26] CAGGCCTATGAACAGGAAGCCCAGAATGTATCGGATGTACAGAAGTCCGGATGTTCCAAG CLCuMV-Fai2 CAGGCCCATGTATAGGAAGCCCAGAATGTATCGGATGTACAGAGGTCCGGATGTTCCAAA CLCuMV-Fai1 CAGGCCCATGTATAGGAAGCCCAGAATGTATCGGATGTACAGAGGTCCGGATGTTCCAAA CLCuMV-Mul CAGGCCCATGTATAGGAAGCCCAGAATGTATCGGATGTACAGAGGTCCGGATGTTCCAAA CLCuMV-Ok CAGGCCTATGAACAGGAAGCCCAGAATGTATCGGATGTACAGAAGTCCGGATGTTCCAAA OYVMV-201 CAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAG OYVMFV-[Ind] CAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAG OYVMFV-[301] CAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAG CLCuLV-[802a] CAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAG CLCuLV-[804a] CAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAG ICMV CAGACCCATCAATCGGAAGCCCAGGTGGTATCGGATGTATAGAAGCCCAGATGTTCCTAA ToLCMV CAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG PaLCV CAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG ToLCKV CAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG ToLCBDV CAGGCCCATGAACAGGAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG CLCuFV-Fai CAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTTCCTAG CLCuFV-[72b] CAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTTCCTAG CLCuFV-[806b] CAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTTCCTAG ToLCBV CAGGCCCATGAATCGGAAGCCCATGTTTTACAGGATGTTCAGAGGTCCTGATGTTCCTAG ToLCBV-[Ban4] CAGGCCCATGAATCGGAAGCCCATGTTTTACAGGATGTTCAGAGGTCCTGATGTTCCGAG ToLCNdV-Mld CAGGCCGATGAACAGAAAACCCAGAATGTACAGAATGTATAGAAGTCCTGACGTGCCAAG ToLCNdV-[Luf] CAGGCCGATGAACAGAAAACCCAGAATGTACAGAATGTATAGAAGTCCCGACGTGCCAAG ToLCNdV-Svr CAGGCCGATGAACAGAAAACCCAGAATGTACAGAATGTATAGAAGTCCCGACGTGCCAAG ToLCNdV-[Lu] CAGGCCGATGAACAGAAAACCCAGAATGTACAGAATGTATAGAAGTCCCGACGTGCCAAG SLCCV CAGGCCGATGAACAGAAAACCCAAGATGTACAGGATGTATAGAAGTCCCGATGTGCCAAG TYLCTHV-[1] CCGACCTGCATACAGAAAGCCCAGGATCTACAGAATGTATAGAAGCCCTGATGTCCCTAA TYLCTHV-[2] CCGACCTGCATACAGAAAGCCCAGGATCTACAGAATGTATAGAAGCCCTGATGTCCCTAA TbLCCNV CAGGCCCATGTACCGGAAGCCCATGATGTACCGGATGTACAGAAGCCCTGATGTTCCAAG ToLCTWV TCGGCCCTTGTTCAGAAAGCCCAAGATGTACAGGATGTATAAAAGCCCAGATGTTCCTCG PepLCV CCGGACCATGTACAGAAAGCCCAGGATATACAGGATGTACAAAAGCCCTGATGTTCCTCG TbLCJV ACGGCCCATGTATCGGAAGCCCAGGATGTTCCGAATGTACAGAAGCCCTGATATCCCTAA ToLCV-D1 TCGGCCCATGTACCGAAAGCCCATGATGTACAGGCTGTTCAGAAGCCCTGATGTTCCACG ToLCV-A1 TCGGCCCATGTACAGAAAGCCCATGATGTACAGGCTGTTCAGAAGCCCTGATGTTCCACG ToLCV TCGGCCCATGTACAGAAAGCCCATGATGTACAGGCTGTTCAGAAGCCCTGATGTTCCACG AYVV CAGGCCCATGTACCGCAAGCCCAGACTGTACAGAATGTACAGAACCCCTGATGTGCCCAA ToLCLV GAGGCCCATGTATCGGAAACCCAGAATGTACAGAATGTACAGAAGCCCTGATGTGCCCAA [ 601 660] RANDOM TGGTTGTCATA--CCATACT-GGTACAGAACTTCTAAAAGAG-CGCAACGTCGCCTGTGC CLCuMV-[62] GGGTTGTGAAGGCCCATGTAAGGTACAATCTTTTGAGTCCAGACATGATGTTGTTCATAT CLCuMV-[26] GGGTTGTGAAGGCCCATGTAAGGTACAATCTTTTGAGTCCAGACATGATGTTGTTCATAT CLCuMV-Fai2 GGGTTGTGAAGGCCCATGTAAGGAACAATCTTTGGAGTCCAGACATGATGTTGTTCATAT CLCuMV-Fai1 GGGTTGTGAAGGCCCATGTAAGGTACAATCTTTTGAGTCGAGACATGATGTCGTTCATAT CLCuMV-Mul GGGTTGTGAAGGCCCATGTAAGGTACAATCTTTTGAGTCGAGACATGATGTCGTTCATAT CLCuMV-Ok GGGTTGTGAAGGCCCATGTAAGGTACAGTCTTTTGAGTCCAGACATGATGTTGTTCATAT OYVMV-201 GGGATGTGAGGGTCCCTGTAAGGTACAGTCGTTTGAATCTCGACACGATGTCGTTCATAT OYVMFV-[Ind] GGGATGTGAGGGTCCCTGTAAGGTACAGTCGTTTGAGTCTCGACACGATGTCGTTCATAT OYVMFV-[301] GGGATGTGAGGGTCCCTGTAAGGTACAGTCGTTTGAATCTCGACACGATGTCGTTCATAT CLCuLV-[802a] GGGATGTGAGGGTCCCTGTAAGGTACAGTCGTTTGAATCTCGACACGATGTCGTTCATAT CLCuLV-[804a] GGGATGTGAGGGTCCCTGTAAGGTACAGTCGTTTGAATCTCGACACGATGTCGTTCATAT ICMV GGGCTGTGAAGGCCCATGTAAGGTCCAGTCGTTCGAGTCGAGACACGATGTGGTCCATAT ToLCMV AGGATGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAGTCCAGACACGATGTAGTCCATAT PaLCV AGGATGTGAAGGCCCATGTAAGGTCCAGTCTTTTGAGTCTAGACATGACATTCAGCATAT ToLCKV AGGATGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAGTCCAGACACGATGTAGTCCATAT ToLCBDV AGGCTGTGAAGGCCCATGTAAGGTGCAGTCCTTTGAGTCTAGACATGACATTCAGCATAT CLCuFV-Fai AGGATGTGAAGGTCCATGTAAGGTTCAGTCGTTTGAGTCCAGACATGATATTCAGCATAT CLCuFV-[72b] AGGATGTGAAGGTCCATGTAAGGTTCAGTCGTTTGAGTCCAGACATGATATTCAGCATAT CLCuFV-[806b] AGGATGTGAAGGTCCATGTAAGGTTCAGTCGTTTGAGTCCAGACATGATATTCAGCATAT ToLCBV AGGCTGTGAGGGTCCATGTAAGGTCCAATCCTTTGAGTCAAGACACGATATAATTCATAT ToLCBV-[Ban4] AGGCTGTGAGGGTCCATGTAAGGTCCAGTCCTTTGAGTCAAGACACGATGTAGTTCATAT ToLCNdV-Mld GGGCTGTGAAGGCCCTTGCAAGGTGCAGTCCTTTGAATCCAGGCACGATGTCTCTCATAT ToLCNdV-[Luf] GGGCTGTGAAGGCCCTTGTAAGGTGCAGTCTTTTGAATCTAGGCACGATGTATCGCATAT ToLCNdV-Svr GGGCTGTGAAGGCCCTTGTAAAGTGCAGTCCTTTGAATCTAGGCACGATGTCTCTCATAT ToLCNdV-[Lu] GGGTTGTGAAGGACCTTGTAAGGTGCAATCATTTGAATCCAGGCACGATGTCTCTCATAT SLCCV GGGATGTGAAGGCCCTTGTAAAGTTCAGTCGTTCGAATCTAGGCACGATGTCTCTCATAT TYLCTHV-[1] GGGATGTGAGGGCCCATGTAAGGTCCAATCTTTCGATGCGAAGAACGACATTGGACATAT TYLCTHV-[2] GGGATGTGAGGGCCCATGTAAGGTCCAATCTTTCGATGCGAAGAACGACATTGGACATAT TbLCCNV GGGTTGTGAAGGCCCATGTAAAGTTCAATCATGTGAGGCCCGTCATGATGTTTCACATAC ToLCTWV TGGTTGTGAAGGCCCATGTAAGGTACAGTCATTTGAACAGCGTCATGATATAGCCCATGT PepLCV GGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTATGAACAACGTCATGATGTAGCCCATGT TbLCJV GGGCTGTGAAGGCCCGTGTAAGGTCCAGTCGTTTGAGAAGAAAAATGATGTTGGTCATTC ToLCV-D1 GGGCTGTGAAGGCCCATGTAAGGTCCAGTCATATGAGCAGCGTCATGATGTGGCCCATGT ToLCV-A1 GGGCTGTGAAGGCCCATGTAAGGTTCAATCATATGAACAGCGTCATGATGTGGCCCATGT ToLCV GGGCTGTGAAGGCCCATGTAAGGTCCAATCATATGAGCAGCGTCATGATGTGGCCCATGT AYVV AGGTTGTGAAGGCCCATGTAAGGTCCAATCTTATGAACAGAGGCACGACATATCCCATGT ToLCLV GGGTTGTGAAGGCCCGTGTAAGGTCCAGTCATATGAGCAGAGACATGATGTATCCCATGT [ 661 720] RANDOM CAGTACACGCGCGGATGGGTA-GCTACTATACGCTGGTTCCGTAGCGGGTAACGATATAC CLCuMV-[62] TGGTAAGGTAATGTGTATTTCTGATGTTACTCG-TGGTGTCGGTTTGACCCATCGTATTG CLCuMV-[26] TGGTAAGGTAATGTGTATTTCTGATGTTACTCG-TGGTGTCGGTTTGACCCATCGTATTG CLCuMV-Fai2 TGGTAAGGTAATGTGTATTTCTGATGTTACTCG-TGGTGTCGGTTGGACCCATCGTATTG CLCuMV-Fai1 TGGTAAGGTAATGTGTATTTCTGATGTTACTCG-TGGTGTCGGTTTGACCCATCGTATTG CLCuMV-Mul TGGTAAGGTAATGTGTATTTCTGATGTTACTCG-TGGTGTCGGTTTGACCCATCGTATTG CLCuMV-Ok TGGTAAGGTAATGTGTATTTCTGATGTTACTCG-TGGTGTCGGTTTGACCCATCGTATTG OYVMV-201 TGGTAAGGTAATGTGTATTTCGGATGTTACGCG-TGGAGTCGGTTTGACCCATCGTATAG OYVMFV-[Ind] TGGTAAGGTAATGTGTATTTCGGATGTTACGCG-TGGAGTCGGTTTGACCCATCGTATAG OYVMFV-[301] TGGTAAGGTAATGTGTATTTCGGATGTTACGCG-TGGAGTCGGTTTGACTCATCGTATAG CLCuLV-[802a] TGGTAAGGTAATGTGTATTTCGGATGTTACGCG-TGGAGTCGGTTTGACCCATCGTATAG CLCuLV-[804a] TGGTAAGGTAATGTGTATTTCGGATGTTACGCG-TGGAGTCGGTTTGACCCATCGTATAG ICMV AGGTAAGGTCATGTGCATCTCTGATGTCACTCG-TGGAATTGGGCTTACACATCGGGTGG ToLCMV AGGCAAGGTCATGTGTATTAGTGATGTCACTCG-TGGAACCGGGCTGACCCATAGAGTTG PaLCV AGGTAAAGTTATGTGTATTAGTGATGTTACTCG-TGGAAATGGGCTGACCCATAGAGTTG ToLCKV AGGCAAGGTCATGTGTATTAGTGATGTCACTCG-TGGAACCGGGCTGACCCATAGAGTTG ToLCBDV AGGTAAAGTCATGTGTGTCAGTGATGTTACTCG-TGGGACTGGGCTGACCCATCGAGTGG CLCuFV-Fai AGGTAAAGTAATGTGTGTTAGTGATGTTACTCG-TGGTACTGGGCTGACCCATAGAGTTG CLCuFV-[72b] AGGTAAAGTAATGTGTGTTAGTGATGTTACTCG-TGGTACTGGGCTGACCCATAGAGTTG CLCuFV-[806b] AGGTAAAGTAATGTGTGTTAGTGATGTTACTCG-TGGTACTGGGCTGACCCATAGAGTTG ToLCBV AGGGAAGGTCATGTGTATTAGTGATGTCACTCG-CGGTACGGGGTTAACACATAGAGTTG ToLCBV-[Ban4] AGGGAAGGTCATGTGTATTAGTGATGTGACTCG-TGGTACGGGGTTAACACATAGAGTTG ToLCNdV-Mld TGGTAAAGTCATGTGCGTTAGTGATGTTACCCG-TGGAACTGGACTCACACATCGCGTAG ToLCNdV-[Luf] TGGCAAGGTCATGTGTGTTAGTGACGTTACACG-AGGAACTGGACTCACACATCGCGTAG ToLCNdV-Svr TGGCAAAGTCATGTGTGTTAGTGATGTTACCCG-AGGAACTGGACTCACACATCGCGTAG ToLCNdV-[Lu] TGGCAAAGTCATGTGTGTTAGTAGTGTTACCCG-AGGAACTGGACTCACACATCGCGTGG SLCCV TGGTAAGGTGATGTGTATCAGTGATGTTACACG-AGGCTCCGGACTCACACATCGCGTTG TYLCTHV-[1] GGGCAAGGTAATATGTCTGTATGACGTTACCCG-TGGTATTGGGCTTACTCATCGAGTTG TYLCTHV-[2] GGGCAAGGTAATATGTCTGTATGACGTTACCCG-TGGTATTGGGCTTACTCATCGAGTTG TbLCCNV TGGTAAGGTTATTTGTGTATCGGATGTTACTCG-TGGTAACGGTATTACTCACCGTGTTG ToLCTWV GGGCAAGGTAATATGTGTGTCCGATGTCACACG-AGGTAATGGGCTGACCCATCGTGTTG PepLCV AGGGAAGGTAATTTGTGTGTCAGATGTCACTCG-AGGTAATGGGCTGACACACCGTGTTG TbLCJV TGGTACTTTGTTATGTGTTTCTGATGTTACTCG-TGGTAACGGTCTTACTCATCGTTCTG ToLCV-D1 GGGTAAGGTCCTTTGTGTTTCTGATGTCACTCG-AGGTACTGGAATAACTCATCGCACTG ToLCV-A1 CGGTAAGGTCCTTTGTGTTTCTGATGTCACAAG-GGGTACGGGAATAACTCATCGCACTG ToLCV GGGTAAGGTCCTTTGTGTTTCTGATGTCACTAG-GGGTACTGGAATAACGCATCGCACTG AYVV AGGTAAAGTATTATGTGTTAGTGATGTCACGCG-TGGTAATGGGCTTACACATCGTGTTG ToLCLV GGGTAAAGTGTTGTGTGTTAGTGATGTCACTCG-TGGAAATGGGCTTACCCATCGTGTGG [ 721 780] RANDOM CTAATACATACCTCTATTGTATTAACACGC-TATTCACTCCCTTGCGGG-AGTCGACTGC CLCuMV-[62] GTAAACGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGATGAAAAT CLCuMV-[26] GTAAACGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGATGAAAAT CLCuMV-Fai2 GTAAACGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGATGAAAAT CLCuMV-Fai1 GTAAACGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGATGAAAAT CLCuMV-Mul GTAAACGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGATGAAAAT CLCuMV-Ok GTAAACGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGATGAAAAT OYVMV-201 GTAAGCGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGACGAGAAC OYVMFV-[Ind] GTAAGCGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGACGAGAAC OYVMFV-[301] GTAAGCGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGACGAGAAC CLCuLV-[802a] GTAAGCGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGACGAGAAC CLCuLV-[804a] GTAAGCGTTTTTGTG-TCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGACGAGAAC ICMV GTAAGAGGTTTTGCG-TTAAGTCCATTTACATCCTGGGCAAGATATGGATGGATGAAAAC ToLCMV GTAAGCGTTTTTGTG-TTAAGTCTGTTTACGTTTTGGGGAAGATATGGATGGACGAAAAT PaLCV GTAAGCGTTTTTGTG-TTAAGTCTGTTAATGTTTTGGGCAAGATCTGGATGGATGAAAAT ToLCKV GTAAGCGTTTTTGTG-TTAAGTCTGTTTACGTTTTGGGGAAGATATGGATGGATGAGAAC ToLCBDV GTAAAAGGTTTTGTG-TTAAGTCTGTGTATGTTTTGGGTAAGATATGGATGGACGAAAAT CLCuFV-Fai GTAAGAGATTTTGTG-TTAAGTCTGTTTATGTGTTGGGTAAGATCTGGATGGATGAGAAC CLCuFV-[72b] GTAAGAGATTTTGTG-TTAAGTCTGTTTATGTGTTGGGTAAGATCTGGATGGATGAGAAC CLCuFV-[806b] GTAAGAGATTTTGTG-TTAAGTCTGTTTATGTGTTGGGTAAGATCTGGATGGATGAGAAC ToLCBV GTAAGCGGTTTTGTG-TCAAGTCAGTATACGTTTTGGGTAAAATATGGATGGATGAGAAT ToLCBV-[Ban4] GTAAGCGATTTTGCG-TTAAGTCAGTATACGTTTTGGGTAAAATTTGGATGGATGAGAGC ToLCNdV-Mld GGAAGCGATTTGGTG-TGAAATCTGTCTATGTGCTGGGAAAGATATGGATGGATGAAAAC ToLCNdV-[Luf] GGAAGCGATTCTGTG-TGAAATCCGTATATCTGCAGGGCAAGATATGGATGGATGAAAAC ToLCNdV-Svr GGAAGCGATTCTGTG-TGAAATCTGTCTATGTGCTGGGAAAGATATGGATGGATGAAAAC ToLCNdV-[Lu] GGAAGCGATTCTGTG-TGAAATCCGTCTATGTGCTAGGAAAGATATGGATGGATGAAAAC SLCCV GAAAGCGATTTTGTG-TGAAATCTGTTTATGTGTTGGGAAAGATATGGATGGACGGAAAT TYLCTHV-[1] GCAAGCGTTTCTGTG-TGAAGTCACTTTATTTTGTCGGGAAGATCTGGATGGATGAAAAT TYLCTHV-[2] GCAAGCGTTTCTGTG-TGAAGTCACTTTATTTTGTCGGGAAGATCTGGATGGATGAAAAT TbLCCNV GCAAGAGGTTCTGTG-TTAAATCCATTTACGTCATTGGGAAAATATGGATGGACGAAAAT ToLCTWV GGAAGAGGTTTTGTG-TTAAGTCCATTTATGTGTTGGGTAAGATATGGATGGATGAGAAT PepLCV GTAAA-GGTCCTGTAATCAAGTCTGTTTACGTATGGGGAAGAATTTGGATGGATGAGA-T TbLCJV GCAAGAGATTTTGT-ATAAAATCTTGTTATATTATTGGTAAAATCTGGATGGATGAAAAC ToLCV-D1 GGAAGAGATTTTGT-ATTAAATCTATTTATGTTTTGGGTAAGATCTGGATGGATGACAAC ToLCV-A1 GGAAGAGATTTTGT-ATTAAATCTATATATGTTCTGGGCAAGATATGGATGGATGACAAC ToLCV GGAAGAGATTTTGT-ATTAAATCTATTTATGTCCTGGGCAAGATCTGGATGGATGATAAC AYVV GTAAGAGATTCTGTG-TTAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAAT ToLCLV GTAAGAGATTCTGTG-TGAAGTCCGTTTATGTGTTGGGCAAAATTTGGATGGATGAGAAT [ 781 840] RANDOM AGTAGG--TAAGATTTGAGCGCCTAGTCGGGGGGTTCGCACAGCAATCGCTAAAGCGCTC CLCuMV-[62] ATTAAGACCAAGAATCATACGAATTCGGTGATGTTCTTTTTAGTCCGCGATCGA-CGTCC CLCuMV-[26] ATTAAGACCAAGAATCATACGAATTCGGTGATGTTCTTTTTAGTCCGCGATCGA-CGCCC CLCuMV-Fai2 ATTAAGACCAAGAATCATACGAATTCGGTGATGTTCTTTTTAGTCCGCGATCGA-CGTCC CLCuMV-Fai1 ATAAAGACCAAGAATCACACGAATTCGGTGATGTTCTTTTTAGTCCGCGATCGA-CGTCC CLCuMV-Mul ATAAAGACCAAGAATCACACGAATTCGGTGATGTTCTTTTTAGTCCGCGATCGA-CGTCC CLCuMV-Ok ATTAAGACCAAGAATCACACGAATTCGGTGATGTTCTTTTTAGTCCGCGATCGA-CGTCC OYVMV-201 ATCAAGACCAAGAACCATACGAATTCGGTGATGTTTTTCCTTGTTCGTGATCGA-CGACC OYVMFV-[Ind] ATCAAGACGAAGAACCATACGAATTCGGTGATGTTTTTCCTTGTTCGTGATCGA-CGACC OYVMFV-[301] ATCAAGACCAAGAACCGTACGAATTCGGTGATGTTTTTCCTTGTTCGTGATCGA-CGACC CLCuLV-[802a] ATCAAGACCAAGAACCATACGAATTCGGTGATGTTTTTCCTTGTTCGTGATCGA-CGACC CLCuLV-[804a] ATCAAGACCAAGAACCATACGAATTCGGTGATGTTTTTCCTTGTTCGTGATCGA-CGACC ICMV ATTAAGACCAAGAATCACACGAATAGCGTAATGTTCTTCCTTGTAAGGGATCGT-AGGCC ToLCMV ATAAAGACCAAGAATCATACGAACAGTGTCATGTTTTTTCTTGTTCGTGACCGT-CGTCC PaLCV ATTAAGACTAAGGATCACACGAATAGTGTGATGTTCTTTTTAGTTAGGGATCGT-AGACC ToLCKV ATCAAGACCAAGAATCATACGAACAGTGTCATGTTTTTTCTTGTTCGTGACCGT-CGTCC ToLCBDV ATTAAGACCAAGAATCACACCAATAGTGTGATGTTTTTTCTTGTTAGGGATCGT-AGGCC CLCuFV-Fai ATTAAGACGAAGAATCACACGAATAGTGTGATGTTTTTCTTGGTTAGAGATCGT-AGACC CLCuFV-[72b] ATTAAGACGAAGAATCACACGAATAGTGTGATGTTTTTCTTGGTTAGAGATCGT-AGACC CLCuFV-[806b] ATTAAGACGAAGAATCACACGAATAGTGTGATGTTTTTCTTGGTTAGAGATCGT-AGACC ToLCBV ATCAAGACTAAGAATCACACGAATAGTGTTATGTTTTTTCTTGTTCGTGACCGT-CGCCC ToLCBV-[Ban4] ATAAAGACTAAGAATCATACTAATAGTGTTATGTTTTTTCTTGTTCGTGACCGT-CGTCC ToLCNdV-Mld ATCAAGACAAAAAACCATACTAACAGTGTCATGTTTTTTTTGGTCCGTGACCGT-CGTCC ToLCNdV-[Luf] ATCAAGACAAAAAACCATACTAACAGTGTCATGTTTTTTTTGGTTCGTGACCGT-CGTCC ToLCNdV-Svr ATCAAGACAAAAAACCATACTAACAGTGTCATGTTTTTTCTGGTTCGTGACCGT-CGTCC ToLCNdV-[Lu] ATCAAGACAAAAAACCATACTAACAGTGTCATGTTTTTTTTAGTTCGTGACCGT-CGTCC SLCCV ATCAAAACTAAAAATCACACTAATAGTGTAATATTTTTTCTGGTTCGAGACCGT-CGTCC TYLCTHV-[1] ATTAAGGTTAAGAATCATACTAACACCGTTTTATTCTGGATAGTTAGGGATCGG-CGTCC TYLCTHV-[2] ATTAAGGTTAAGAATCATACTAACACCGTTTTATTCTGGATAGTTAGGGATCGC-AGTCC TbLCCNV ATTAAATTTAAGAATCATACAAATACAGTAATGTTTTTTCTTGTTAGAGATCGA-CGTCC ToLCTWV ATCAAGACGAAGAATCACACAAATACTGTGATGTTCTTCTTAGTCCGTGATAGA-AGGCC PepLCV ATCAAG-CCAAGAATCACACCAAT-CTGTCATGTTTTTTTTAGTTCGGGATAGG-AGACC TbLCJV ATCAAGACTAAGAATCACACTAACACTGTCATGTTCTGGTTAGTTAGGGATAGA-CGTCC ToLCV-D1 ATTAAGACGAGGAACCATACGAATACAGTTATGTTCTTCTTGGTCCGTGATAGG-AGGCC ToLCV-A1 ATCAAGACTAGGAATCATACGAATACAGTTATGTTCTTCTTGGTCCGTGATAGG-AGGCC ToLCV ATTAAGACTAGGAACCATACGAATACAGTTATGTTCTTCTTGGTCCGTGATAGG-AGGCC AYVV ATCAAAACTAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGACAGA-AGGCC ToLCLV ATCAAGACTAAGAACCATACCAACACTGTAATGTTCTTTCTGGTCCGCGATAGA-AGGCC [ 841 900] RANDOM TTTTGATGGCGTATAGG----TAGTTA--TATCTAAGTTAAGGGGTTAGGA--CTATCAC CLCuMV-[62] TGTTGACAAACCTCAGGATTTTGGTGAGGTATTCAATATGTTTGACAACGAACCCAGTAC CLCuMV-[26] TGTTGACAAACCTCAGGATTTTGGTGAGGTATTCAATATGTTTGACAACGAACCCAGTAC CLCuMV-Fai2 TGTTGACAAACCTCAGGATTTTGGTGAGGTATTCAATATGTTTGACAAGCAACCCAGTAC CLCuMV-Fai1 TGTTGACAAACCTCAGGATTTTGGTGAGGTATTTAATATGTTTGACAATGAACCCAGTAC CLCuMV-Mul TGTTGACAAACCTCAGGATTTTGGTGAGGTATTTAATATGTTTGACAATCAACCCAGTAC CLCuMV-Ok TGTTGACAAACCTCAGGATTTTGGTGAGGTATTCAATATGTTTGACAACGAACCCAGTAC OYVMV-201 GGTAGATAAACCACAAGATTTTGGTGAAGTATTTAATATGTTTGATAACGAGCCTAGTAC OYVMFV-[Ind] GGTAGATAAACCACAAGATTTTGGTGAAGTATTTAATATGTTTGATAATGAGCCCAGTAC OYVMFV-[301] GACAGATAAACCACAAGATTTTGGTGAAGTATTTAATATGTTTGATAACGAGCCCAGTAC CLCuLV-[802a] GGTAGATAAACCACAAGATTTTGGTGAAGTATTTAATATGTTTGATAACGAGCCCAGTAC CLCuLV-[804a] GGTAGATAAACCACAAGATTTTGGTGAAGTATTTAATATGTTTGATAACGAGCCCAGCAC ICMV TGTTGATAAGCCTCAGGATTTTGGTGAAGTATTTAATATGTTTGATAATGAGCCCAGTAC ToLCMV TGTTGACAAGCCACAAGACTTTGGAGAGGTGTTCAATATGTTTGACAACGAGCCTAGCAC PaLCV TGTAGATAAACCACAAGATTTTGGAGAGGTATTTAACATGTTTGATAATGAGCCCAGTAC ToLCKV TGTTGACAAGCCACAAGACTTTGGAGAGGTGTTCAATATGTTTGACAACGAGCCTAGCAC ToLCBDV TGTTGATAAACCCCAAGACTTTGGAGAAGTGTTTAACATGTTTGATAATGAGCCCAGTAC CLCuFV-Fai TGTTGATAAACCTCAAGATTTTGGAGAGGTATTTAATATGTTTGATAATGAGCCCAGTAC CLCuFV-[72b] TGTTGATAAACCTCAAGATTTTGGAGAGGTATTTAATATGTTTGATAATGAGCCCAGTAC CLCuFV-[806b] TGTTGATAAACCTCAAGATTTTGGAGAGGTATTTAATATGTTTGATAATGAGCCCAGTAC ToLCBV TGTTGATAAGCCACAGGACTTTGGAGATGTGTTCAATATGTTTGACAACGAGCCTAGCAC ToLCBV-[Ban4] TGTTGATAAGCCCCAAGACTTTGGAGATGTGTTCAATATGTTTGACAATGAGCCTAGCAC ToLCNdV-Mld TACAGGATCCCCACAGGATTTTGGGGAAGTTTTTAACATGTTTGACAATGAACCGAGCAC ToLCNdV-[Luf] TACAGGAACACCCCAAGACTTCGGGGAAGTTTTTAACATGTTTGACAATGAACCGAGCAC ToLCNdV-Svr TACAGGATCTCCCCAGGATTTCGGGGAAGTGTTTAATATGTTTGACAATGAACCGAGCAC ToLCNdV-[Lu] TACAGGAGCTCCCCATGATTTTGGGGAAGTGTTTAATATGTTTGACAATGAACCGAGCAC SLCCV TACAGGAACTCCACAGGACTTTGGGGAGGTTTTTAATATGTTCGACAATGAACCAAGCAC TYLCTHV-[1] TACTGGAACGCCTTATGATTTTCAGCAGGTCTTTAATGTATATGATAATGAACCCAGCAC TYLCTHV-[2] TACTGGAACGCCTTATGATTTTCAGCAGGTCTTTAATGTATATGATAATGAACCAAGCAC TbLCCNV AAGTGGTACTCCTATGGATTTCCAGCAAGTCTTTAATTGTTATGACAATGAACCTAGCAC ToLCTWV TTTTGGTACTCCACAAGATTTCGGTCAGGTCTTTAATATGTATGATAATGAGCCTAGCAC PepLCV ATTTGGTACTCCACAGGACTTCGGTCAGGTGTTCAACATGTATGATAATGAGCCCAGTAC TbLCJV CCTTACAACCCCGTATGGATTTCAAGAGGCATTCAACATGTTTGATAACGAACCCAGTAC ToLCV-D1 CTATGGGACTCCGAAGGATTTTGGGCAGGTGTTTAATATGTATGACAATGAGCCCAGCAC ToLCV-A1 CTATGGGACTCCTAAGGATTTGGGGCAGGTCTTCAACATGTATGACAATGAGCCCAGTAC ToLCV CTATGGGACTCCTAAGGATTTTGGGCAGGTGTTCAACATGTATGACAATGAGCCCAGCAC AYVV CTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCTAGTAC ToLCLV CTTCGGTACTGCTATGGATTTTGGTCAGGTTTTTAACATGTATGATAACGAGCCCAGTAC [ 901 960] RANDOM ACTTGGATTGGAGAACTTGCATCGT-ATGGGTATCAGA-----AAGAGGTTTCAAGCAA- CLCuMV-[62] AGCAACTGTGAAGAATAGTCATAGGGACCGTTACCAGGTGTTGAGGAAATGGCATGCAAC CLCuMV-[26] AGCAACTGTGAAGAATAGTCATAGGGACCGTTACCAGGTGTTGAGGAAATGGCATGCAAC CLCuMV-Fai2 AGCAACTGTGAAGAATAGTCATAGGGACCGTTACCAGGTGTTGAGGAAATGGCATGCAAC CLCuMV-Fai1 AGCGACTGTGAAGAATAGTCATAGGGACCGTTACCAGGTGTTGAGGAAATGGCATGCAAC CLCuMV-Mul AGCGACTGTGAAGAATAGTCATAGGGACCGTTACCAGGTGTTGAGGAAATGGCATGCAAC CLCuMV-Ok AGCAACTGTGAAGAATAGTCATAGGGACCGTTACCAGGTGTTGAGGAAATGGCATGCAAC OYVMV-201 GGCGACCGTGAAGAACATGCATAGGGATCGATACCAGGTGTTGAGGAAATGGCATGCAAC OYVMFV-[Ind] GGCGACCGTGAAGAACATGCATAGGGATCGTTACCAGGTGTTGAGGAAATGGCATGCAAC OYVMFV-[301] GGCCACCGTTAAGAACATGCATAGGGATCGGTACCAGGTGTTGAGGAAATGGCATGCAAC CLCuLV-[802a] GGCGACCGTGAAGAACATGCATAGGGATCGGTACCAGGTGTTGAGGAAATGGCATGCAAC CLCuLV-[804a] GGCGACCGTGAAGAACATGCATAGGGATTGGTACCAGGTGTTGAGGAAATGGCATGCAAC ICMV AGCTACCGTGAAGAACATGCATCGTGATCGCTATCAAGTTCTCAGGAAGTGGCATGCCAC ToLCMV TGCTACTGTTAAGAATATGCACAGAGATCGTTATCAGGTGTTGAGGAAGTGGCATGCAAC PaLCV GGCTACTGTGAAGAATGTTCATCGTGATAGGTATCAAGTTCTTCGGAAATGGCATGCAAC ToLCKV TGCTACTGTTAAGAATATGCACAGAGATCGTTATCAGGTGTTGAGGAAGTGGCATGCAAC ToLCBDV GGCTACTGTGAAGAATGTGCATCGTGACAGGTATCAAGTGCTTCGGAAATGGCATGCAAC CLCuFV-Fai GGCGACTGTGAAGAATGTTCATCGTGATAGGTATCAAGTTCTGCGCAAATGGTATGCAAC CLCuFV-[72b] GGCGACTGTGAAGAATGTTCATCGTGATAGGTATCAAGTTCTGCGCAAATGGTATGCAAC CLCuFV-[806b] GGCGACTGTGAAGAATGTTCATCGTGATAGGTATCAAGTTCTGCGCAAATGGTATGCAAC ToLCBV TGCAACTGTGAAGAATATGCATAGAGATCGTTATCAGGTGTTGAGGAAGTGGCATGCAAC ToLCBV-[Ban4] TGCAACTGTGAAGAATATACACAGAGATCGTTATCAGGTGTTGAGGAAATGGCATGCAAC ToLCNdV-Mld AGCAACGGTGAAGAACATGCATCGTGATCGTTATCAAGTCTTACGGAAGTGGCATCCGAC ToLCNdV-[Luf] AGCAACGGTGAAGAACATGCATCGTGACCGTTATCAAGTCTTACGGAAGTGGCATGCGAC ToLCNdV-Svr AGCAACGGTGAAGAACATGCATCGTGATCGTTATCAAGTCTTACGGAAGTGGCATGCGAC ToLCNdV-[Lu] AGCAACGGTGAAGAACATGCATCGTGATCGTTATCAAGTGTTACGGAAGTGGCATGCGAC SLCCV TGCAACGGTGAAGAATATGCATCGTGATCGATACCAAGTTCTGCGCAAATGGCATGCCAC TYLCTHV-[1] TGCTACTGTGAAGAACGACCAGCGTGATCGTTTCCAGGTTATAAGGAGGTTCCAGGCAAC TYLCTHV-[2] TGCTACTGTGAAGAACGACCAGCGTGATCGTTTCCAGGTTATAAGGAGGTTCCAGGCAAC TbLCCNV TGCTACTGTAAAAAACGATTTAAGGGATCGTTTTCAAGTTCGTCGTAAATTTTATTCAAC ToLCTWV TGCAACGGTGAAGAATGACAATAGAGATAGGTTTCAAGTTCTCCGTCGATTCCAGGCTAC PepLCV TGCGACGGTGAAAAACGATAACAGAGATCGATTTCAAGTCCTTCGTCGTTTCCAGGCAAC TbLCJV AGCTACTATCAAGCAGGACCTAAGAGATCGTCTGCAGGTGTTACACAAGTTCCAGGCTAC ToLCV-D1 AGCTACTGTTAAGAACGACATGAGGGATGGCTTTCAGGTTATCAAGAAGTGGTCCGCAAC ToLCV-A1 TGCTACTGCGAAGAATGATATGAGGGATGGCTTTCAAGTTATCAAGAAGTGGTCCGCAAC ToLCV AGCTACTGTGAAGAACGACATGAGGGATGGCTTTCAAGTTATCAAGAAGTGGTCCGCAAC AYVV TGCTACTATCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAAC ToLCLV TGCCACTGTGAAGAATGATATGAGAGATCGTTACCAGGTGCTAAGGAAGTTTACTGCAAC [ 961 1020] RANDOM -------GGCGGTGCGAAAGCTCT-----AGC-GGTTCTGACCTGCCGATTGAT--AAAT CLCuMV-[62] CGTTACGGGTGGTCAATATGCTAGTAAGGAACAAGCTTTGGTCAAGAAGTTTGTCAGAGT CLCuMV-[26] CGTTACGGGTGGTCAATATGCTAGTAAGGAACAAGCTTTGGTCAAGAAGTTTGTCAGAGT CLCuMV-Fai2 CGTTACGGGTGGTCAATATGCATCGAAGGAACAAGCTTTGGTCAAGAAGTTTGTCAGAGT CLCuMV-Fai1 CGTTACGGGTGGTCAATATGCATCGAAGGAACAGGCTTTGGTCAAGAAGTTTGTCAGAGT CLCuMV-Mul CGTTACGGGTGGTCAATATGCATCGAAGGAACAGGCTTTGGTCAAGAAGTTTGTCAGAGT CLCuMV-Ok CGTTACGGGTGGTCAATATGCTAGTAAGGAACAGGCTTTGGTCAAGAAGTTTGTCAGAGT OYVMV-201 CGTTACTGGTGGACAATATGCGAGTAAGGAGCAGGCTTTGGTCAAGAAGTTTGTTAGGGT OYVMFV-[Ind] CGTTACTGGTGGTCAATATGCAGCGAGGGAACAGGCGTTGGTTAAGAAATTTGTCAGGGT OYVMFV-[301] CGTTACTGGTGGTCAATATGCATCGAAGGAACAGGCGTTGGTTAAGAAGTTTATCAGGGT CLCuLV-[802a] CGTTACTGGTGGTCAATATGCGAGTAAGGAGCAGGCATTGGTCAAGAAGTTTGTTAGGGT CLCuLV-[804a] CGTTACTGGTGGTCAATATGCGAGTAAGGAGCAGGCATTGGTCAAGAAGTTTGTTAGGGT ICMV GGTCACTGGTGGTCAGTATGCGAGCAAGGAGCAGGCTTTAGTTAGGCGTTTTTTTAGGGT ToLCMV TGTCACCGGTGGACAGTACGCTTCAAAGGAACAGGCATTAGTGAAGAAGTTTGTTAGGGT PaLCV TGTTACGGGTGGACAATATGCGTCAAAGGAACAAGCCCTCGTGAAGAAGTTTGTTAGGGT ToLCKV TGTCACCGGTGGACAGTACGCTTCAAAGGAACAGGCATTAGTGAAGAAGTTTGTTAGGGT ToLCBDV TGTTACTGGTGGACAGTATGCGTCTAAGGAACAAGCTCTCGTGAAGAAGTTTGTTAGGGT CLCuFV-Fai TGTCACCGGTGGACAATACGCTTCAAAGGAACAAGCTCTCGTGAAGAAATTTATTAGAGT CLCuFV-[72b] TGTCACCGGTGGACAATACGCTTCAAAGGAACAAGCTCTCGTGAAGAAATTTATTAGAGT CLCuFV-[806b] TGTCACCGGTGGACAATACGCTTCAAAGGAACAAGCTCTCGTGAAGAAATTTATTAGAGT ToLCBV TGTCACTGGTGGACAGTACGCTTCAAAGGAACAGGCATTAGTGAAGGAGTTTGTTAAGGT ToLCBV-[Ban4] TGTCACTGGTGGTCAATACGCTTCAAAGGAACAGGCATTAGTGAACAAGTTTGTTAAGGT ToLCNdV-Mld TGTGACGGGAGGAACATATGCATCTAGGGAGCAAGCATTAGTTAGGAAGTTTGTTAGGGT ToLCNdV-[Luf] TGTGACGGGAGGAACCTATGCATCTAGGGAGCAAGCATTAGTTAGGAAGTTTGTTAGGGT ToLCNdV-Svr TGTGACGGGAGGAACATATGCATCTAAGGAGCAAGCATTAGTTAGGAAGTTTGTTAGGGT ToLCNdV-[Lu] TGTGACGGGAGGAACATATGCATCTAAGGAGAACGCATTAGTTAGGAAGTTTGTTAGGGT SLCCV TGTGACGGGAGGAGCATACGCATCAAGGGAGCAAGCATTAGTTAGGAAGTTTGTTAGGGT TYLCTHV-[1] AGTTACTGGTGGACAATATGCAGCTAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGT TYLCTHV-[2] AGTTACTGGTGGACAATATGCAGCTAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGT TbLCCNV GGTTACGGGCGGACAGTATGCTTGTAAGGAGCAGGCGTTGGTGAAGAGATTTATCCGTCT ToLCTWV GGTGACTGGCGGTCAGTATGCGTGCAAAGAACAAGCTCTAGTTAGGAAGTTTATGAAAAT PepLCV TGTGACAGGTGGGCAATATGCAAGCAAGGAGCAAGCCATAGTTAGGAAATTCATGAAGGT TbLCJV TGTCACTGGTGGACAGTATGCGTCCAAGGAACAGGCTGTGATCAAGAAGTTCTGGAAGAT ToLCV-D1 TGTCACTGGTGGGCAATATGCGTCTAAGGAGCAGGCTATTATCAATAGGTTTTATAAAAT ToLCV-A1 TGTCACTGGTGGGCAATATGCGTCCAAGGAGCAGGCGATTATTAATAGATTTTATAAAAT ToLCV TGTCACTGGTGGGCAATATGCGTCTAAGGAGCAGGCTATTATCAATAGGTTTTATAAAAT AYVV AGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTGGTTAAGAAATTTATGAAGAT ToLCLV TGTGACTGGTGGCCAGTATGCCTCTAAGGAGCAGGCGTTAGTTAGGAAGTTCATGAAAAT [ 1021 1080] RANDOM CAGGGGTT-TTTGATTAATCATAGGCCTGGCTCCGAAATTAATGCGACTCTTAGCGTGCC CLCuMV-[62] TAACAATTATGTTGTTTACAATCAACAGGAAGCAGGGAAATACGAGAATCATACGGAAAA CLCuMV-[26] TAACAATTATGTTGTTTACAATCAACAGGAAGCAGGGAAATACGAGAATCATACGGAAAA CLCuMV-Fai2 TAACAATTATGTTGTTTACAATCAACAGGAAGCAGGGAAATACGAGAATCATACGGAAAA CLCuMV-Fai1 TAACAATTATGTTGTTTACAATCAACAGGAAGCAGGAAAATACGAGAATCATACGGAAAA CLCuMV-Mul TAACAATTATGTTGTTTACAATCAACAGGAAGCAGGAAAATACGAGAATCATACGGAAAA CLCuMV-Ok TAACAATTATGTTGTTTACAATCAACAGGAAGCAGGGAAATACGAGAATCATACGGAAAA OYVMV-201 TAACAACTACGTTGTTTACAACCAGCAGGAAGCAGGAAAATACGAGAATCACACCGAGAA OYVMFV-[Ind] TAACAATTATGTTGTTTACAACCAGCAGGAGGCAGGAAAATACGAGAATCACACCGAGAA OYVMFV-[301] TAACAATTATGTCGTTTACAACCAGCAAGAGGCAGGAAAAAACGAGAATCACACCGAGAA CLCuLV-[802a] TAACAACTACGTTGTTTACAACCAGCAGGAAGCAGGAAAATACGAGAATCACACCGAGAA CLCuLV-[804a] TAACAACTACGTTGTTTACAACCAGCAGGAAGCAGGAAAATACGAGAATCACACCGAGAA ICMV TAATAATTATGTTGTGTATAACCAGCAAGAGGCTGGGAAATATGAGAACCATACTGAGAA ToLCMV TAATAATTATGTTGTTTATAACCAGCAAGAGGCTGGGAAATATGAGAATCATACTGAAAA PaLCV TAACAATTATGTTGTATATAACCAGCAAGAAGCTGGCAAGTATGAGAATCATTCTGAGAA ToLCKV TAATAATTATGTTGTTTATAACCAGCAAGAGGCTGGGAAATATGAGAATCATACTGAAAA ToLCBDV TAATAATTATGTTGTGTATAACCAGCAAGAAGCTGGCAAGTATGAGAATCATTCTGAGAA CLCuFV-Fai TAATAATTATGTTGTGTATAACCAGCAGGAAGCTGGCAAGTATGAGAATCATTCTGAGAA CLCuFV-[72b] TAATAATTATGTTGTGTATAACCAGCAGGAAGCTGGCAAGTATGAGAATCATTCTGAGAA CLCuFV-[806b] TAATAATTATGTTGTGTATAACCAGCAGGAAGCTGGCAAGTATGAGAATCATTCTGAGAA ToLCBV TAATAATTACGTTGTTTATAACCAGCAAGAGGCTGGGAAATATGAGAATCATTCTGAGAA ToLCBV-[Ban4] TAATAATAATGTTGTTTATAACCAGCAAGAGGCTGGGAAATATGAAAATCATTCTGAGAA ToLCNdV-Mld TAATAATTATGTAGTTTATAATCAACAAGAGGCCGGCAAGTATGAGAATCATACTGAAAA ToLCNdV-[Luf] TAATAATTATGTTGTTTATAATCAACAAGAGGTCGGCAAGTATGAGAATCATACTGAAAA ToLCNdV-Svr TAATAATTATGTTGTTTATAATCAACAAGAGGCCGGCAAGTATGAGAATCATACTGAAAA ToLCNdV-[Lu] TAATAATTATGTTGTTTATAATCAACAAGAGGCAGGCAAGTATGAGAATCATACTGAAAA SLCCV CAATAATTATGTTGTTTACAATCAACAAGAGGCCGGCAAGTATGAGAATCATACTGAAAA TYLCTHV-[1] TAATAATTATGTAGTTTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAA TYLCTHV-[2] TAATAATTATGTAGTTTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAA TbLCCNV TAATACTCATGTTGTTTACAACCATCAAGAACAGGCGAAGTACGAGAATCATACGGAGAA ToLCTWV CAACAACCATGTTACTTATAATCACCAAGAGGCTGCTAAATATGATAACCATACAGAGAA PepLCV GAACAATCATGTGACTTACAACCATCAAGAAGCTGCGAAGTATGACAATCACACAGAGAA TbLCJV CAATCATCATGTTACTTACAATCATCAGGAGCAGGCTAAATATGAGAATCATACTGAGAA ToLCV-D1 ATATAACCATTGTACTTACAATCATCAGGAAGCTGCAAAGTATGAGAATCATACGGAGAA ToLCV-A1 TTATAATCATTGTACTTATAATCATCAGGAAGCTGCAAAGTATGAGAATCATACTGAGAA ToLCV ATATAACCATTGTACTTACAATCATCAGGAAGCTGCAAAGTATGAGAATCATACTGAGAA AYVV TAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAATCATACTGAGAA ToLCLV TAATAACTATGTTGTGTATAATCATCAGGAGGCTGCTAAGTATGAAAATCATACTGAGAA [ 1081 1140] RANDOM CAT-TTGCCGCTAAATTGAGTGGTTAGCTTAC-TAACTGACTCATTATCCAGTCGTTTTT CLCuMV-[62] TGCGTTAATGCTTTATATGGCTTGTA-CTCACGCTAGCAACCCTGTTTATGCTACGTTGA CLCuMV-[26] TGCGTTAATGCCTTATATGGCTTGTA-CTCACGCTAGCAACCTTGTTTATGCTACGTTGA CLCuMV-Fai2 TGCGTTAATGCTTTATATGGCTTGTA-CTCACGCTAGCAACCCTGTTTATGCTACGTTGA CLCuMV-Fai1 TGCGTTAATGCTTTATATGGCTTGTA-CTCACGCTAGCAACCCTGTTTATGCTACGTTGA CLCuMV-Mul TGCGTTAATGCTTTATATGGCTTGTA-CTCACGCTAGCAACCCTGTTTATGCTACGTTGA CLCuMV-Ok TGCGTTAATGCTTTATATGGCTTGTA-CTCACGCTAGCAACCCTGTTTATGCTACGTTGG OYVMV-201 TGCATTGATGCTTTATATGGCTTGTA-CCCATGCTAGCAATCCTGTTTATGCTACTCTTA OYVMFV-[Ind] TGCATTGATGCTTTATATGGCTTGTA-CCCATGCTAGTAACCCAGTGTATGCTACGCTTA OYVMFV-[301] TGCATTGATGCTTTACATGGCTTGTA-CTCATGCTAGCAACCCAGTTTATGCTACGCTTA CLCuLV-[802a] TGCATTGATGCTTTATATGGCTTGTA-CCCATGCTAGTAACCCAGTTTATGCTACGCTTA CLCuLV-[804a] TGCATTGATGCTTTATATGGCTTGTA-CCCATGCTAGTAACCCAGTTTATGCTACGCTTA ICMV TGCATTAATGTTGTACATGGCGTGTA-CTCATGCCTCTAATCCTGTATACGCTACGTTGA ToLCMV TGCATTGATGTTGTATATGGCGTGTA-CTCACGCCTCTAACCCTGTGTATGCTACTTTGA PaLCV TGCGTTAATGTTGTATATGGCATGTA-CTCATGCCTCTAACCCAGTGTATGCTACTTTGA ToLCKV TGCATTGATGTTGTATATGGCGTGTA-CTCACGCCTCTAACCCTGTGTATGCTACTTTGA ToLCBDV TGCGTTAATGTTGTATATGGCATGTA-CACATGCCTCTAACCCAGTGTATGCTACTTTGA CLCuFV-Fai TGCTTTAATGTTGTATATGGCGTGTA-CTCACGCCTCTAACCCAGTGTATGCTACCTTGA CLCuFV-[72b] TGCTTTAATGTTGTATATGGCGTGTA-CTCACGCCTCTAACCCAGTGTATGCTACCTTGA CLCuFV-[806b] TGCTTTAATGTTGTATATGGCGTGTA-CTCACGCCTCTAACCCAGTGTATGCTACCTTGA ToLCBV TGCGTTGATGTTGTATATGGCATGTA-CTCATGCCTCTAATCCTGTGTATGCTACGCTTA ToLCBV-[Ban4] TGCGTTGATGTTGTATATGGCATGTA-CTCATGCCTCTAATCCTGTGTATGCCACGCGTA ToLCNdV-Mld TGCCTTAATGTTGTATATGGCCTGTA-CTCACGCATCAAATCCTGTATATGCTACTTTGA ToLCNdV-[Luf] CGCATTAATGTTGTATATGGCCTGTA-CTCACGCATCAAATCCTGTATATGCTACTTTGA ToLCNdV-Svr CGCATTAATGTTGTATATGGCCTGTA-CTCACGCATCAAATCCTGTATATGCTACTTGGA ToLCNdV-[Lu] CGCATTAATGTTGTATATGGCCTGTA-CTCACGCATCAAATCCTGTATATGCTACTTTGA SLCCV TGCATTAATGTTGTATATGGCCTGTA-CTCACGCATCGAACCCTGTTTACGCGACTTTGA TYLCTHV-[1] TGCTTTGTTGTTATATATGGCATGTA-CTCATGCCTCTAACCCTGTGTATGCTACTTTGA TYLCTHV-[2] TGCTTTGTTGTTATATATGGCATGTA-CTCATGCCTCTAACCCTGTGTATGCTACTTTGA TbLCCNV TGCATTATTGTTGTACATGGCGTGTA-CTCATGCCTCTAATCCTGTATATGCGACGTTGA ToLCTWV TGCTTTGTTGTTGTATATGGCATGTA-CTCATGCCAGTAATCCTGTGTATGCTACTTTGA PepLCV TGCGCTTTTATTGTATATGGCATGTA-CGCATGCCAGTAATCCAGTGTATGCAACTTTGA TbLCJV CGCATTAATATTGTATATGGCTAGTA-CTCATGCCAGTAATCCCGTGTATGCAACTTTGA ToLCV-D1 TGCATTATTATTGTATATGGCATGTA-CCCATGCCTCTAACCCAGTGTATGCTACGTTGA ToLCV-A1 TGCATTATTATTGTATATGGCATGTA-CACATGCCTCTAACCCAGTGTATGCTACTTTGA ToLCV TGCATTATTATTGTATATGGCATGTA-CACATGCCTCTAACCCAGTGTATGCTACGTTGA AYVV TGCCTTGTTATTGTATATGGCTTGTA-CTCATGCCAGTAATCCAGTGTATGCTACTTTGA ToLCLV TGCCCTTTTATTGTATATGGCATGTA-CTCATGCCAGTAACCCAGTGTATGCAACATTGA [ 1141 1200] RANDOM CCTGAAGGACTTGATATCACGCTCCTGGGCTTTACC-TCGTGCAGAGGCCCCTAAC-TCG CLCuMV-[62] AGATTAGGATATATTTTTATGACTCTGTAACGAATTGATATTAATAAAGTTTGAATTTTA CLCuMV-[26] AGATTAGGATATATTTTTATGACTCTGTAACGAATTGATATTAATAAAGTTTGAATTTTA CLCuMV-Fai2 AGATTAGGATATATTTTTATGACTCTGTAACGAATTGATATTAATAAAGTTTGAATTTTA CLCuMV-Fai1 AGATTAGGATATATTTTTATGACTCTGTAACGAATTGATATTAATGAAGTTTGAATTTTA CLCuMV-Mul AGATTAGGATATATTTTTATGACTCTGTAACGAATTGATATTAATGAAGTTTGAATTTTA CLCuMV-Ok AGATTAGGATATATTTTTATGACTCTGTAACGAATTGATATTAATAAAGTTTGAATTTTA OYVMV-201 AGATTAGAATATATTTTTATGACTCTGTAACGAACTAATATTAATAAAGTTTAAATTGTA OYVMFV-[Ind] AGATTCGGATTTATTTTTATGACTCTGTAACGAATTGAA-TTAATAAAGTTTGAATTTTA OYVMFV-[301] AGATTCGGATTTATTTTTATGACTCTGTAACGAATTGAAATTAATAAAGTTTGAATTTTA CLCuLV-[802a] AGATTAGAATATATTTTTATGACTCTGTAACGAACTAATATTAATAAAGTTTGAATTTTA CLCuLV-[804a] AGATTAGAATATATTTTTATGACTCTGTAACGAACTAATATTAATAAAGTTTGAATTTTA ICMV AGATTAGAATTTATTTCTATGATTCAGTGA------GCAATTAATAAATATTTAATTTTA ToLCMV AGATACGGATCTATTTTTATGATTCAGTATCGAA------TTAATAAATATTGAATTTTA PaLCV AGATACGGATCTATTTCTATGATTCCGTAACAAA------TTAATAAATATTAAATTTTA ToLCKV AGATACGGATCTATTTTTATGATTCAGTATCGAA------TTAATAAATATTGAATTTTA ToLCBDV AGATACGGATCTATTTCTATGATTCCGTAACAAA------TTAATAAATATTGAATTTTA CLCuFV-Fai AGATACGGATCTACTTCTATGATTCCGTGACAAA------TTAATAGATATTGAATTTTA CLCuFV-[72b] AGATACGGATCTACTTCTATGATTCCGTGACAAA------TTAATAAATATTGAATTTTA CLCuFV-[806b] AGATACGGATCTACTTCTATGATTCCGTGACAAA------TTAATAAATATTGAATTTTA ToLCBV AGATTCGTATTTACTTCTACGATTCTGTAACCAATTGATATTAATAAATATTAAATTTTA ToLCBV-[Ban4] AGATTCGTATTTACTTCTACGATTCTGTAACCAACCGATATTAATAAATATTAAATTTTA ToLCNdV-Mld AAATCCGGATCTATTTCTATGATTCGGTAACAAATTAATAAATATCAAGCTTTA-TATCA ToLCNdV-[Luf] AAATCCGGATCTATTTCTATGATTCGGTAACAAATTAATAAATATCGAGCTTTA-TATCA ToLCNdV-Svr AAATCCGGATCTACTTTTATGATTCGGCCACAAATTAATAAATATCCAGTTTTA-TATCA ToLCNdV-[Lu] AAATCCGGATCTATTTCTATGATTCGGTCACAAATTAATAAATATCAAGCTTTA-TATCA SLCCV AAATCCGGATCTATTTTTATGATTCTGTAACAAATTAATATATATTCAATTTCA-CATCA TYLCTHV-[1] AAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAATATTAAATTTTA-TATCA TYLCTHV-[2] AAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAATATTAAATTTTA-TATCA TbLCCNV AAGTGCGCATCTATTTCTATGATTCACAAATGAATTAATAAATATTGAATTTTA-TATCA ToLCTWV AAATCAGAATTTATTTCTATGATTCTGTTCAAAATTAATAAATTTTAAATGTTA---TTA PepLCV AGATCAGAATCTACTTCTACGACTCTGTACAAAATTAATAAATATTGAATTTTA-T--CA TbLCJV AAATCAGGTTCTATTTTTATGATTCTGTTCAGAATTAATAAATTTTATATTTTA-TATCA ToLCV-D1 AGATACGGATCTATTTCTATGATTCGACCCAGAATTAATAAAAATTAAATTTTA-TATCA ToLCV-A1 AAATACGGATCTATTTCTATGATTCGATTCAGAATTAATAAAAATTATATTTTA-TATCA ToLCV AGATACGGATCTATTTCTATGATTCGATTCAGAATTAATAAAAATTAAATTTTA-TATCA AYVV AGATCAGAATCTATTTCTATGATTCTGTTCAGAATTAATAAAGATTGAATTTTA---TTA ToLCLV AGATCAGAATCTATTTCTATGATTCTGTTCAGAATTAATAAATATTGAATTTTA---TTA [ 1201 1260] RANDOM TAGGTGTAGCTTA--CTAACTGACTCATACAATGATAGAGAGCTGGGGGTA-GTATCCAG CLCuMV-[62] TTTCTGAATATTGATCTACATACATAGTTTGTTGGATTACATTGTACAATACATGTTCTA CLCuMV-[26] TTTCTGAATATTGATCTACATACATAGTTTGTTGGATTACATTGTACAATACATGTTCTA CLCuMV-Fai2 TTTCTGAATATTGATCTACATACATAGTTTGTTGGATTACATTGTACAATACATGTTCTA CLCuMV-Fai1 TTTCTGAATATTGATCTACATACATAGTTTGTTGGATTACATTGTACAATACATGTTCTA CLCuMV-Mul TTTCTGAATATTGATCTACATACATAGTTTGTTGGATTACATTGTACAATACATGTTCTA CLCuMV-Ok TTTCTGAATATTGATCTACATACATAGTTTGTTGGATTACATTGTACAATACATGTTCTA OYVMV-201 TATCTGAATATTGGTCTACATACATTGTTTGATTAATTACATTGTACAATACATGTTCAA OYVMFV-[Ind] TATCTGAATATTGGTCTACATACATTGTCTGATTAACTACATTGTACAATACATGTTCGA OYVMFV-[301] TATCTGAATATTGGTCTACATACATTGTTTGATTAATTACATTGTACAATACATGTTCAA CLCuLV-[802a] TATCTGAATATTGGTCTACATACATTGTTTGATTAATTACATTGTACAATACATGTTCAA CLCuLV-[804a] TATCTGAATATTGGTCTACATACATTGTTTGATTAATTACATTGTACAATACATGTTCAA ICMV TTAAATTAGACTGCTCAACACGGTCAGTCCCATGGATTACATTGTACAATACATGCTCTA ToLCMV TTGAATATGTTTGGTCTACATATACAACGTGGTGTAATACATTCCATAATACATAATCAA PaLCV TTGAATATGATTGTTCTACATATACAATGTGTTGTAATACATCCCATAAAACATGATCAA ToLCKV TTGAACATGTTTGGTCTACATATACAACGTGGTGTAATACATTCCATAATACATGATCAA ToLCBDV TTGAATAAGATTGGTCTACATATACAATATGTTCTAATACATCCCATAATACATGATCAA CLCuFV-Fai TTGAAGATGATTGGTCTACAAATACAACATGTTGTAATACATTCCATAATACATGATCAA CLCuFV-[72b] TTGAAGATGATTGGTCTACAAATACAACATGTTGTAATACATTCCATAATACATGATCAA CLCuFV-[806b] TTGAAGATGATTGGTCTACAAATACAACATGTTGTAATACATTCCATAATACATGATCAA ToLCBV TTGAATATGATTGTTCTACATATACAACATGATGTAATACATTCCATAATACATGATCAA ToLCBV-[Ban4] TTAAATATGATTGTTCTACATATATAACATGATGTAATACACTCCATAATACATGATCAA ToLCNdV-Mld TA--TGAAGTCTG---TACATCAATAGTTTGTTCCATTACATTATCCAAAACATGATAAA ToLCNdV-[Luf] TA--TGAAGTCCA---TACATCAATCGTTTGTTCCAATACATTATCCAATACATGATAAA ToLCNdV-Svr TA--CGAAGTCCA---TACATCAATTGTTTGCTCCAATACATTATCCAATACATGATAAA ToLCNdV-[Lu] TA--AGACGTCCA---TACATCAATCGTCTGTTCCAATACATTATCCAATACATGATAAA SLCCV TA--TGTTGTCCA---TACATCAATTGTCTTTTCCAATACATTGTCCAATACATGGTAAA TYLCTHV-[1] TGTTCTTCAATTA-----CATCAATTGTTCCTTCTAATACATTGTACAATACATGAGATA TYLCTHV-[2] TGTTCTTCAATTA-----CATCAATTGTTCCTTCTAATACATTGTACAATACATGAGATA TbLCCNV TGTTTTTCAATTA-----CATCTATTGTTCCATTCAGTACATCATATAATACATGACTAA ToLCTWV TATGTGAAAACTGA---GCATCGACTGTGCCCTCTATTACATTGTATAGTACATTTGTCA PepLCV TTTCTGAAAGACGA---GCATCAATGGTGCCCTCCAATACATTGTACAATACATGTCTAA TbLCJV TG--AAATGTCCGT---ACATACAATGTTCCTTGTAATCTATTATACAATACATGATCAA ToLCV-D1 TGATTTTCGATT-----ACATCAAATGTTGACTCTAATACATCATACAATACATGATCAA ToLCV-A1 TGGTTTTCGATT-----ACATCAAATGTTGACTCCAATACATTATACAATACATGATCAA ToLCV TGATCTTCAATT-----ACATCAAATGTTGAGTCTAGTACATTATACAATACATGATCAA AYVV TATGAGAATTTGTT---ACATATTCTGTATTTTCCAATACATCCCATAATACATGATCAC ToLCLV TATATGAAAATTGA---GCATCAATTGTGCCTTCGAATACATTGTACAATACATGATTGA [ 1261 1320] RANDOM TCGTTTTTCCTGAAGGACTTGATATCACGCTCCTGGGCTTTACCTCGTGCAGAGGCCCCT CLCuMV-[62] CAGCTTTAATAACTAAATTAATTGAAATTACACCGAGATTGTTCAGATATTTGAGGACTT CLCuMV-[26] CAGCTTTAATAACTAAATTAATTGAAATTACACCGAGATTGTTCAGATATTTGAGGACTT CLCuMV-Fai2 CAGCTTTAATAACTAAATTAATTGAAATTACACCGAGATTGTTCAGATATTTGAAGACTT CLCuMV-Fai1 CAGCTTTAATAACTAAATTAATTGAAATTACACCGAGATTGTTCAGATATTTGAGGACTT CLCuMV-Mul CAGCTTTAATAACTAAATTAATTGAAATTACACCGAGATTGTTCAGATATTTGAGGACTT CLCuMV-Ok CAGCTTTAATAACTAAATTAATTGAAATTACACCGAGATTGTTCAGATATTTGAGGACTT OYVMV-201 CGGCTTTAATAACTAAATTAATTGAGATTACACCTAGATTGTTGAGATGTTTGAGGACTT OYVMFV-[Ind] CGGCTTTAATAACTAAATTAAGTGAGATTACACCTAGATTATTGAGATATTTGAGGACTT OYVMFV-[301] CGGCTTTAATAACTAAATTAAGTGAGATTACACCTAGATTGTTGAGATATTTGAGGACTT CLCuLV-[802a] CGGCTTTAATAACTAAATTAAGTGAGATTACACCTAGATTGTTGAGATACTTGAGTACTT CLCuLV-[804a] CGGCTTTAATAACTAAATTAAGTGAGATTACACCTAGATTGTTGAGATACTTGAGTACTT ICMV CGGCTTTTACAATAGTATTAATACTTATAACTCCTAAGCTATCTAAGTATTTCAATACTT ToLCMV CGGCTCTGATTACATTGTTAATACTGATAACTCCTAAATTATTTAAGTACTTAAGCACTT PaLCV CTGATCTGATTACATTATTAATACTGTTAACTCCTAAATTATCTAAATATTTTAAAACTT ToLCKV CGGCTCTAATTACATTGTTAATACTGATAACTCCTAAATTATTTAAGTACTTAAGCACTT ToLCBDV CTGCACGAATTACATTATTAATACTGATAACTCCTAAATTATCTAAATATTTAAACACTT CLCuFV-Fai CTGCTCTAACTACATTATTAATACTGACAATTCCTAAGTTATTTAAATATTTAAGCACTT CLCuFV-[72b] CTGCTCTAACTACATTATTAATACTGACAATTCCTAAGTTATTTAAATATTTAAGCACTT CLCuFV-[806b] CTGCTCTAACTACATTATTAATACTGACAATTCCTAAGTTATTTAAATATTTAAGCACTT ToLCBV CTGCTCGATTTACATTGTTAATACTGATAACTCCTAGATTATTTAAAAATATATGCACTT ToLCBV-[Ban4] CTGCTCGATTTACATTGTTAATACTGATAACTCCTAAATTATTTAAAAACTTATACACTT ToLCNdV-Mld CTGCTCTTATTACATTATAAATTCCTATTACACCAAGCATATCCAGGTACCTAAGGACCT ToLCNdV-[Luf] CTGCCCTTATTACATTATAAATTCCTATGACACCCAACCTATCCAGGTACTTAAGGACCT ToLCNdV-Svr CTGCTCTTATTACATTATAAATTCCTATGACACCTAACATATCCAGGTACTTAAGGACCT ToLCNdV-[Lu] CTGCTCTTATTACATTATATATTCCTATGACACCTAACATATCCAGGTACTTAAGGACCT SLCCV CTGCTCTTGTTACATTATAAATACCAATCACTCCTAACATATCCAGGTACTTAAGGACCT TYLCTHV-[1] TTGCCCTAATTACATTGTTTATACTAATCACGCCTAATCTATTTAAATATTTATTACATT TYLCTHV-[2] TTGCCCTAATTACATTGTTTATACTAATCACGCCTAATCTATTTAAATATTTATTACATT TbLCCNV AAGCCCTAATACAATTGTTAATGCTAATCACTCCCAACCTATCTAAATATTTAATAAATT ToLCTWV TTGCTCTAATTACATTGTTTAAACTAATAACTCCTAAATTGTCTAAATACTTCATACATT PepLCV TCGCCCTAATTACATTGTTTATACTAATCACTCCTAAATGGTCTAAATACTTGATACATT TbLCJV CTGCTCTAATTACATTATTAATTGAAATCACACCCAGACTATCTAAGTAGTTCATCACTT ToLCV-D1 CTGACCTAATTACATTGTTAATGCTAATAACTCCTAACCTATCTAAATACTTCATGACTT ToLCV-A1 CTGATCTAATTACATTGTTAATGCTAATAACTCCTAAACTATCTAAATACTTCATGATTT ToLCV CTGATCTAATTACATTGTTAATGCTAATAACTCCTAAACTATCTAAATACTTCATGACTT AYVV ATGCTCTAATTACATTGTTAATACTAATTACACCCAAATTATTTAAATATTTCATACATT ToLCLV TTGCCCTAATTACATTGTTAATGCTAATAACTCCTAATCTATCTAAATACTTCATACATT [ 1321 1380] RANDOM AACTCGTAGGTGTAGCTTACTAACTGACTCATACAATGATAGAGAGCTGGCATTGGGGGA CLCuMV-[62] GGGTTTTGAATACC-CTTAAAAAAAGACCAGTCTGAGGGTGTAAGGTCGTCCAGATTCGG CLCuMV-[26] GGGTTTTGAATACC-CTTAAGAAAAGACCAGTCTGAGGGTGTAAGGTCGTCCAGATTCGG CLCuMV-Fai2 GGGTTTTGAATACC-CTTAAGAAAAGACCAGTCTGAGGCTGTAAGGTCGTCCAGATTCCG CLCuMV-Fai1 GGGTTTTGAATACC-CTTAAGAAAAGACCAGTCTGAGGCTGTAAGGTCGTCCAGATTCGG CLCuMV-Mul SCGTTTTGAATACC-CTTAAGAAAAGACCAGTCTGAGGCTGTAAGGTCGTCCAGATTCGG CLCuMV-Ok GGGTTTTGAATACC-CTTAAGAAAAGACCAGTCTGAGGGTGTAAGGTCGTCCAGATTCGG OYVMV-201 GGGTTTTGAATACC-CTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTCGG OYVMFV-[Ind] GGGTTTTGAATACC-CTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTCGG OYVMFV-[301] GGGTTTTGAATACC-CTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTCGG CLCuLV-[802a] GGGTTTTGAATACC-CTTAAGAAAAGACCAGTCGGAGGGTATAAGGTCGTCCAGATTCGG CLCuLV-[804a] GGGTTTTGAATACC-CTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTCGG ICMV GGGTCTTAAATACC-CTCAAGAAACGCCAGGTCTGAGGCTGTAAGGTCGTCCAGACCTTG ToLCMV GGGTCTTAAATACC-CTTAAGAAGCGACCAGTCGGAGGCTGTGAGGTCATCCGGATTCGG PaLCV GAGTCTTAAAGACC-CCTAAGAAACGACCAGTCTGAGGCTGTGAAGTCATCCAGATTCGG ToLCKV GGGTCTTAAATACC-CTTAAGAAACGACCAGTCGGAGGCTGTAAGGTCATCCAGATTCGG ToLCBDV GAGTCTTAAAGACT-CTTAAGAAACGACCAGTCTGAGGCTGTGAAGTCATCCAGATTCGG CLCuFV-Fai GAGTCCTAAAGACC-CTTAAGAAACGACCAGTCGGAGGCTGTGAGGTCATCCAGATTCGG CLCuFV-[72b] GAGTCCTAAAGACC-CTTAAGAAACGACCAGTCGGAGGCTGTGAGGTCATCCAGATTCGG CLCuFV-[806b] GAGTCCTAAAGACC-CTTAAGAAACGACCAGTCGGAGGCTGTGAGGTCATCCAGATTCGG ToLCBV GGGACTTAAAGACC-CTTAAGAAATGACCAGTCAGAGGCTGTGAGGTCGTCCAGATTCGG ToLCBV-[Ban4] GGGTTTTAAAGACC-CTAAAGAAATGACCAGTCAGAGGCTGTGAGGTCGTCCAGATTCGG ToLCNdV-Mld GGGTTTTGAAGACT-CTCAAGAAAATCCCAATCTGAGGGCGTAAGCCCGTCCAGATTTTG ToLCNdV-[Luf] GGGTTTTAAAGACT-CTCAAGAAAATCCCAATCGGAGGGCGTAAGCCCGTCCAGATTTTG ToLCNdV-Svr GGGTTTTGAAGACT-CTCAAGAAAATCCCAATCTGAGGGCGTAAGCCCGTCCAGATTTTG ToLCNdV-[Lu] GGGTTTTGAAGACT-CTCAAGAAAATCCCAATCTGAGGGCGTAAGCCCGTCCAGATTTGG SLCCV GTGTCTTAAAGACT-CTCAAGAAAATCCCAGTCGGCGGGCGTAAGCCCGTCCATATCTGG TYLCTHV-[1] GATATTTAAATACT-CTTAAGAAACGCGAGGTCTGAGGATGTAAATGAGTCCAGATTTTG TYLCTHV-[2] GATATTTAAATACT-CTTAAGAAACGCGAGGTCTGAGGATGTAAATGAGTCCAGATTTTG TbLCCNV GGTATTTAAATACT-CTTAAGAAATGCGAGGTCTGAGGATGTAAACGAGTCCAGATTTGG ToLCTWV GATATTTAAATACC-CTCAAGAAATGCGAGGTCTGAGGTTGTAAACGAGTCCAAATCTGG PepLCV GATATTTAAATACT-CTTAAGAAACGCGAGGTCTGAGGATGTAAACGAGTCCAAATTTGG TbLCJV GTGTCCTAAAGACC-CTCAAGAAATGCCATGTCTGAGGATGTAAGCGGCTCCAGATCTTG ToLCV-D1 GGGTCTTAAATACC-CTCAAGAAACGCCAAGTCGCTGGTTGTAAGCGAGTGAAAACTGTG ToLCV-A1 GGGTCTTAAATACC-CTCAAGAAACGCCAAGTCGCTGGTTGTAAGCGAGTGAAAACCTTG ToLCV GGGTCTTAAATACC-CTCAAGAAACGCCAAGTCGCTGGTTGTAAGCGAGTGAAAACTGTG AYVV GAACCCTAAATACT-CTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGATCTGG ToLCLV GGTATTTAAATACT-CTTAAGAAATGCCCAGTCCGAGGATGTAAACGAGTCCAGATTTGG [ 1381 1440] RANDOM CAATGTGAAATACAACGTCGCGATAATTTACCACTTGAGTACCGGCATCTTAAAATCACA CLCuMV-[62] AAGGTTAGAAAACAC--TTGTGCAGTCCCAGAGCTTTCCGAGTGTTGTAGTTGAACTGGA CLCuMV-[26] AAGGTTAGAAAACAC--TTGTGCAGTCCCAGAGCTTTCCGAGTGTTGTAGTTGAACTGGA CLCuMV-Fai2 AAGGTTAGAAAACAC--TTGTGCAGTCCCATAGCTTTCCGAGTGTTGTAGTTGAACTGGA CLCuMV-Fai1 AAGGTTAGAAAACAC--TTGTGCAGTCCCAAAGCTTTCCGAGTGTTGTAGTTGAACTGGA CLCuMV-Mul AAGGTTAGAAAACAC--TTGTGCAGTCCCAAAGCTTTCCGAGTGTTGTAGTTGAACTGGA CLCuMV-Ok AAGGTTAGAAAACAC--TTGTGCAGTCCCAGAGCTTTCCGAGTGTTGTAGTTGAACTGGA OYVMV-201 AAGGTTAGAAAACAC--TTGTGTATTTCCAGAGCTTTCCGTAGGTTGTAGTTGAAATGGA OYVMFV-[Ind] AAGGTTAGAAAACAC--TTGTGTATTCCCAGAGCTTTCCGTAGGTTGTAGTTGAAATGGA OYVMFV-[301] AAGGTTAGAAAACAC--TTGTGCACTCCCAGAGCTTTCCGAAGGTTGTAGTTGAATTGGA CLCuLV-[802a] AAGGTTAGAAAACAC--TTGTGCACTCCCAGAGCTTTCCGAAGGTTGTAGTTGAATTGGA CLCuLV-[804a] AAGGTTAGAAAACAC--TTGTGCACTCCCAGAGCTTTCCGAAGGTTGTAGTTGAATTGGA ICMV AAATCCATCCAGCAT--TGATGTAGTCCCAACGCTTTCCTCAGGTTGTGGTTGAACCGTA ToLCMV TAGATTAGGAAACAT--TTGTGTATCCCCAACACTTTCCTCAGGTTGTGATTGAACTGTA PaLCV TAGACTAGAAAACAT--TTGTGCATCCCCAACGCTTTCCTCAGGTTGTAGTTGAACTGTA ToLCKV TAGACTAGGAAACAT--TTGTGTATCCCCAACACTTTCCTCAGGTTGTGATTGAACTGTA ToLCBDV TAGACTAGGAAACAT--TTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAACTGAA CLCuFV-Fai AAAGCTATGAAACAT--TTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAACTGTA CLCuFV-[72b] AAAGCTATGAAACAT--TTGTGTATCCCCAACGCTTTCCTCAGGTTGAGATTGAACTGTA CLCuFV-[806b] AAAGCTATGAAACAT--TTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAACTGTA ToLCBV TAGGCTAGAAAACAT--TTGTGTATCCCCAACGCTTTCCTCAAGTTGTGATTGAATTGTA ToLCBV-[Ban4] TAGGCTAGAAAGCAT--TTGTGTATCCCCAACGCTTTCCTCAAGTTGTGATTGAATTGTA ToLCNdV-Mld AAAGTTAGAAAACAC--TTGTGAAGTCCCAGGGCTTTCCGCAGGTTGTGGTTGAATTGTA ToLCNdV-[Luf] AAAGTTAGAAAACAC--TTGTGAAGTCCCAGGGCTTTCCGCAGGTTGTGGTTGAACTGTA ToLCNdV-Svr AAAGTTAGAAAACAC--TTGTGAAGTCCCAGGGCTTTCCGCAGGGTGTGGGTGAACTGTA ToLCNdV-[Lu] AAAGTTAGAAAACAC--TTGTGAAGCCCCAGGGCTTTCCGCAGGTTGTGGTTGAATTGTA SLCCV AAAGTTATCGCACAT--TTGTGAAGTCCCAGTGCTTTCCGCAGGTTGTGGTTGAACATTA TYLCTHV-[1] CAGGCTAGAAAACAT--TTGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAACTGGA TYLCTHV-[2] CAGGCTAGAAAACAT--TTGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAACTGGA TbLCCNV CAGGTTAGAAAACAT--TTGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAATTGGA ToLCTWV CAAATTAGAAAACAC--TGGTGTATTCCCAACGCTTTCCTCAGGTTGTAGTTGAATTGAA PepLCV CAGATTAGAAAGCAT--TGGTGTAGTCCCCCCGCTTTCCTCAGGTTGTAGTTGAACTGGA TbLCJV AAAATGAGGAAACAC--TTGTGCAAACCCAGCTGGGATCTGAGGTTGTGGTTGAACTGTA ToLCV-D1 AAGTCCATGAAGCAT--TTGTGTATCCCCAATGCTCTCCTCAGGTTGTGATTGAACTGTA ToLCV-A1 AAATCCAGGAAGCAT--TTGTGTATCCCCAATGCTTTCCTCAGGTTGTGATTGAACTGTA ToLCV AAGTCCAGGAAGCAT--TTGTGTATCGCCAATGCTCTCCTCAGGTTGTGATTGAACTGTA AYVV AAGATCAGAAAACAC--TGGTGTATTCCCAACGCTTTCCTCAGGTTGTGATTGAACTGTA ToLCLV CAGATTGGAAAACAT--TGGTGTATCCCCAACGCTTTCCTCAGGTTGTGGTTGAACTGTA [ 1441 1500] RANDOM TCATACCGACAA--GTGCTGGTGACAGATA-GAATGACTCTACCTCTTTGGCCAAAGTTG CLCuMV-[62] TCCTGATCGTGAGTATATCCATATTCGTCGTGAATGGACGGTTGACGTGGCTGATGATCT CLCuMV-[26] TCCTGATCGTGAGTATATCCATATTCGTCGTGAATGGACGGTTGACGTGGCTGATGATCT CLCuMV-Fai2 TCCTGATCGTGAGTATATCCATATTCGTCGTGAATGGACGGTTGACGTGGCTGATGATCT CLCuMV-Fai1 TCCTGATCGTGAGTATGTCCATATTCGTCGTGAATGGACGGTTGACGTGGCTGATGACCT CLCuMV-Mul TCCTGATCGTGAGTATGTCCATATTCGTCGTGAATGGACGGTTGACGTGGCTGATGATCT CLCuMV-Ok TCCTGATCGTGAGTATATCCATATTCGTCGTGAATGGACGGTTGACGTGGCTGATGATCT OYVMV-201 TCCTGAGTGTTATTATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGGTTGAGGATCT OYVMFV-[Ind] TCCTGAGTGTTATTATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGGTTGAGGATCT OYVMFV-[301] TCCTCATTGTTATGATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGGCTGAGGATTT CLCuLV-[802a] TCCTCATTGTTATGATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGGCTGAGGATTT CLCuLV-[804a] TCCTCATTGTTATGATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGGCTGAGGATTT ICMV TCTGGACGGTTATTATGTCCTGGTTCATTACGAACGGTCTGTTGTCGTGTTGAATGATCT ToLCMV CTTGGTCGGTGATGATGTCTTGGTTCATCAGGAATGGCCGGTTGTGATGCTCTGTTATCT PaLCV TTTGGACTTTGATTATGTCTTCTTTCATTGTGAATGGACGGTTGTGGTGTTCTGTTATCT ToLCKV CTTGGACGGTGATGATGTCTTGGTTCATCAGGAATGGCCGGTTGTGATGCTCTGTTATCT ToLCBDV GTTGGATGATGATGATGTCTCTGTTTGTCAGGAATGGCCTGTTGTGGTGCTCTGTTATCT CLCuFV-Fai TCTGGACGGTGATGATGTCTCTGTTCATTAGGAATGCTCGATTGTGGTGCTCTGTTATCT CLCuFV-[72b] TCTGGACGGTGATGATGTCTCTGTTCATTAGGAATGCTCGATTGTGGTGCTCTGTTATCT CLCuFV-[806b] TCTGGACGGTGATGATGTCTCTGTTCATTAGGAATGCTCGATTGTGGTGCTCTGTTATCT ToLCBV TTTGGACGGTGATGATGTCTCTCTCCGACAGGAATGGCCGGTTGTGGTGCTCTGTTATCT ToLCBV-[Ban4] TCTGGACGGTGATGATGTCTCTCTCCGACAGGAATGGCCGGTTGTGGTGCTCTGTTATCT ToLCNdV-Mld TTTGAATCTTGATGATGTCGTGCTGTGTTAGGAAGGGCCTGCTGTCGTGCTTCAAAATTT ToLCNdV-[Luf] TTTGAATCTTGATTATGTCGTGCTGTGTTAAGAAGGGCCTGCTGTCGTGTTTCAAAATTT ToLCNdV-Svr TTTGAATCTTGATTATGTCGTGCTGTGTTAGGAAGGGCCTGCTGTCGTGTTTCCAAATTT ToLCNdV-[Lu] TTTGAATCTTGATTATGTCGTGCTGTGTTAGGAAGGGCCTGCTGTCGTGTTTCAAAATTT SLCCV CCTGCACCTTGATTATGTCGTGTTCCTCTAGACATGGTCTGATGTCGTGTTTTAATATTT TYLCTHV-[1] TTTGTAACGTGATTATGTCGTGGTTCCTCTGGAATGGTCTCTCTAGGTGCCTGGTTATCT TYLCTHV-[2] TTTGTAACGTGATTATGTCGTGGTTCCTCTGGAATGGTCTCTCTAGGTGCCTGGTTATCT TbLCCNV CTTGTATTGTGATTATGTCGTGGTTCCTCAGAAATGGTCTCTCGTGGTGTTTGGTTATCT ToLCTWV TTTGTATTGTCATGACGTCGTGGTTCTGTAGAAATGGTCTCTGGTTGTGTTGTGTTATTT PepLCV TTTGCACCGTGATTATGTCGTGGTTCCTCAGGAACGGCCTCTCGTGGTGTTGTGTTATTC TbLCJV TCTGTATTGTTATTACGTCTTGGTCCCTGTTGAATGATCGTTGATTGTGCGTCGTAATCT ToLCV-D1 TCCGGACTTGAATGATGTCGTGGTTGTAGTTGAACGGGCGCTGGTGGTGCTCTATGATCT ToLCV-A1 TCCGGACTTGAATGATGTCGTGGTTGTAGTTGAACGGGCGCTGGTGGTGCTTTATGATCT ToLCV TCCGGACTTGAATGATGTCGTGGTTGTAGTTGAACGGGCGCTTGTGGTGCTTTATGATCT AYVV TTCTGATCGTTATGATGTCGTTGTTGGTGTTGAATGGCCTCTCGTGGTGCTTGATTATCT ToLCLV TTTGGACTGTTATTATGTCGTGTTCCCGGAAGAATGGTCTCTCGATGTGCTTGGTTATCT [ 1501 1560] RANDOM AAAACGATACCCTACCAACAAGTTTCTAGTCACGGTCTACATT-TATACTTACATCGGAT CLCuMV-[62] TGAAATAGAGGGGATTTGGAACCTCCCAGATATATGCGCCATTCC---------CTGCTT CLCuMV-[26] TGAAATAGAGGGGATTTGGAACCTCCCAGATATATGCGCCATTCC---------CTGCTT CLCuMV-Fai2 TGAAATAGAGGGGATTTGGAACCTCCCAGATATATGCGCCATTCC---------CTGCTT CLCuMV-Fai1 TGAAATAAAGGGGATTTGGAACCTCCCAGATATATGCGCCTTTCC---------CTGCTT CLCuMV-Mul TGAAATAAAGGGGATTTGGAACCTCCCAGATATATGCGCCATTCC---------CTGCTT CLCuMV-Ok TGAAATAGAGGGGATTTGGAACCTCCCAGATATATGCGCCATTCC---------CTGCTT OYVMV-201 TGAAATAGAGGGGATTTGGAACCTTCCAGATATAGACGCCATTCT---------TTGCTT OYVMFV-[Ind] TGAAATAGAGGGGATTTGGAACCTTCCAGATATAGACGCCATTCT---------TTGCTT OYVMFV-[301] TGAAATAAAGGGGATTTGGAACCTCCCAGATAAAGACGCCATTCG---------TTGAAT CLCuLV-[802a] TGAAATAAAGGGGATTTGGAACCTCCCAGATAAAGACGCCATTCG---------TTGAAT CLCuLV-[804a] TGAAATAAAGGGGATTTGGAACCTCCCAGATAAAGACGCCATTCG---------TTGAAT ICMV TGAAATAGAGGGGATTTGGTACCTCCCAGATAAAGACGCCATTCA---------TCGCCT ToLCMV TGAAATATAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCT---------CTGCTT PaLCV TGAAATACAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCT---------CTGCTT ToLCKV TGAAATATAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCT---------CTGCTT ToLCBDV TGAAATAGAGTGGATTTTGAATCTCCCAGGTAAACACGCCATTCA---------CTGCTT CLCuFV-Fai TGAAATACAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCT---------CTGCTT CLCuFV-[72b] TGAAATACAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCT---------CTGCTT CLCuFV-[806b] TGAAATACAGGGGATTTTGAACCTCCCAGATAAACACGCCATTCT---------CTGCTT ToLCBV TGAAATAGAGGGGATTTTGAATTTCCCAGATAAACACGCCATTCT---------CTGTTT ToLCBV-[Ban4] TGAAATAAAGGGGATTTTGAATTTCCCAGATAAACACGCCATTCT---------CTGTTT ToLCNdV-Mld TGAAATACAGGGGATTTCGAATTTCCCAGGTATATACGCCACTCT---------CTTATC ToLCNdV-[Luf] TGAAATACAGGGGATTTCGAATTTCCCAGGTATATACGCCACTCT---------CTGCTC ToLCNdV-Svr TGAAATACAGGGGATTTCGAATTTCCCAGGTATATACGCCACTCT---------CTGCTC ToLCNdV-[Lu] TGAAATACAGGGGATTTCGAATTTCCCAGGTATATACGCCACTCT---------CTGCTC SLCCV TGAAATATAGGGGATTTGGAACCGTCCAGATATACACGCCACTCT---------CTGCTC TYLCTHV-[1] TGAAATATAGGGGATTTTTGACCGTCCAGATATATACGCCACTCTCTGATTGAGTTGC-- TYLCTHV-[2] TGAAATATAGGGGATTTTTGACCGTCCAGATATATACGCCACTCTCTGATTGAGTTGC-- TbLCCNV TGAAATACAGGGGATTTTTGACCGTCCAGATATACACGCCATTCTCTGATTGAGCTGC-- ToLCTWV TGAAATAGAGGGGATTGTTGACTGTCCAGGTATACACGCCATTCTCT---------GCTT PepLCV TGAAATATAGGGGATTGTTGACCGTCCAGATATATACGCCATTCTCTGCTTGAGCTGCTT TbLCJV TGAAATAGAGGGGATTTGGAACCCTCCAGATATACTCTCCATTCTGTG---------CCT ToLCV-D1 TGAAATAGAGGGGATTTGGAACCCTCCAGATATATTCTCCATTCATCGCTTGA------C ToLCV-A1 TGAAATAGAGGGGATTTGGAACCCTCCAGATATACTCGCCATTCATCGCTTGA------C ToLCV TGAAATAGAGGGGATTTGGAACCCTCCAGATATACTCGCCATTCATCGCTTGA------C AYVV TGAAATATAGGGGATTTTTGATTGTCCAGGTATATACGCCATTCTCG---------CATT ToLCLV TGAAATAGAGGGGATTTGGGACCGTCCAGATATACGCGCCACTCTCT---------GCTT [ 1561 1620] RANDOM GAGCCGTAATCAGCGCGACACATTGATAGGGATTCGGCGAAT-TGG-ATTTAGTACCAGT CLCuMV-[62] GAGCTGCAGT-GATGGGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATTGACAG CLCuMV-[26] GAGCTGCAGT-GATGGGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATTGACAG CLCuMV-Fai2 GAGCTGCAGT-GATGGGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATTGACAG CLCuMV-Fai1 GAGCTGCAGT-GATGGGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATTGACAG CLCuMV-Mul GAGCTGCAGT-GATGGGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATTGACAG CLCuMV-Ok GAGCTGCAGT-GATGGGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATTGACAG OYVMV-201 GAGCTGCAGT-GATGCGTTCCCCTGTGCGAGAATCCATGGTTGTGGCAGTTGATGCTAAG OYVMFV-[Ind] GAGCTGCAGT-GATGCGTTCCCCTGTGCGAGAATCCATGGTTGTGGCAGTTGATGCTAAG OYVMFV-[301] GAGCTGCAGT-GATGCGTTCCCCTGTGCGAGAATCCATGGTTGTGGCAGTTGATACTTAG CLCuLV-[802a] GAGCTGCAGT-GATGCGTTCCCCTGTGCGAGAATCCATGGTTGTGGCAGTTGATACTTAG CLCuLV-[804a] GAGCTGCAGT-GATGCGTTCCCCTGTGCGAGAATCCATGGTTGTGGCAGTTGATACTTAG ICMV GAGCTGCAGT-GATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTAATGTGGAC ToLCMV GAGCTGCAGT-GATGAGTTCCCCTGTGCGTGAATCCATGGTCGTGGCAGGCTAATGCTAT PaLCV GAGCTGCAGT-GATGAGTTCCCCTGTGCGTGAATCCATAATTGTGACAGGCTAGTGCTAT ToLCKV GAGCTGCAGT-GATGAGTTCCCCTGTGCGTGAATCCATGGTCGTGACAGGCTAATGCTAT ToLCBDV GAGCTGCAGT-GATGGGTTCCCCGGTGCGTGAATCCATGATCGTGGCAGGCTAGTGCTAT CLCuFV-Fai GAGCTGCAGT-GATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGGCTAATGCTAT CLCuFV-[72b] GAGCTGCAGT-GATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGGCTAATGCTAT CLCuFV-[806b] GAGCTGCAGT-GATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGGCTAATGCTAT ToLCBV GAGCTGCAGT-GATGGGTTCCCCTGTGCGTGAATCCATGGTCGTTGCAGGCTAACGATAT ToLCBV-[Ban4] GAGCTGCAGC-GATGGGTTCCCCTGTGCGTGAATCCATGGTCGTTGCAGGCTAATGCTAT ToLCNdV-Mld GATCCGCAGC-GATGTACTCCCCTGTGAGTGAATCCGTAATCATGGCAGTTGATCGATAT ToLCNdV-[Luf] GATCCGCAGT-GATGTACTCCCCTGTGCGTGAATCCGTGATCATGGCAGTTGATTGATAT ToLCNdV-Svr GATCCGCAGT-GATGTATTCCCCTGTGCGTGAATCCGTGATCATGGCAGTTGATCGATAT ToLCNdV-[Lu] GATCCGCAGT-GATGTATTCCCCTGTGCGTGAATCCGTGATCATGGCAGTTGATCGATAC SLCCV GATCCACAGT-GATGTACTCCCCTGTGCGTGAATCCGTGATCATGGCAATTTATTGACAT TYLCTHV-[1] -------AGT-GAGTAGTTCCCCGGTGCGTGAATCCATTATTGTGACAGCCTATGGCGAC TYLCTHV-[2] -------AGT-GAGTAGTTCCCCGGTGCGTGAATCCATTATTGTGACAATATGTGACAGC TbLCCNV -------AGT-GAGTAGTTCCCCTGTGCGTGAATCCATGATTGTGACAGCCTAAAGCAAC ToLCTWV GAGCTGCAGT-GATGAGTTCCCCTGTGCGAGAATCCATGTGATGCGCAGTTAATTCCAAG PepLCV GAGCTGCAGT-GTGATGTGCCCCTGTGCGTGAATCCATGAGGATGGCAACCTAGAGCGAC TbLCJV GAGCTGCAGT-GATGAGTATCCCTGTGCGTGAATCCATAGTTTGCACAGTCAAGTCCCAC ToLCV-D1 GAG---CAGT-GATGGGTTCCCCTGTGCGTGAATCCATGGTTATGGCAGTTGAAA-TGCA ToLCV-A1 GAG---CAGT-GATGGGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGAAA-TGCA ToLCV GAG---CAGT-GATGGGTTCCCCTGTGCGTGAATCCATGGTTATGGCAGTTGATA-TGCA AYVV GAGTTGCAGT-GAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATCTATGCCGAA ToLCLV GAGTTGCAGT-GATGGGTTCCCCGGTGCGTGAATCCATGGTTGTGACAGTTGATGCTAAT [ 1621 1680] RANDOM AGAAGGAAAAT-TCCATATGTGTCGGGCGGCACACATAGTTCCTATTCACTCGTTATCAG CLCuMV-[62] AT------AATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTG--CGTCT- CLCuMV-[26] AT------AATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTG--CGTCT- CLCuMV-Fai2 AT------AATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTG--CGTCT- CLCuMV-Fai1 AT------AATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTG--CGTCT- CLCuMV-Mul AT------AATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTG--CGCCT- CLCuMV-Ok AT------AATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTG--CGTCT- OYVMV-201 AT------AATAAAAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTG--CGTCT- OYVMFV-[Ind] AT------AATAACTGCATCCGCATTCAAGGTCCACTCGTCTCCTCCTGTGC--ACTCG- OYVMFV-[301] GT------AATAGCTGCATCCACACTCAAGGTCCACTCGTTTCCTCCTGTGC--GCTCT- CLCuLV-[802a] GT------AATAGCTGCATCCACATTCAAGATCCACTCTCCTCCTCCTGGTC--CTCCT- CLCuLV-[804a] GT------AATAGCTGCATCCACATTCAAGATCCACTCTCCTCCTCCTGGTC--CTCCT- ICMV GT------AGTACGAGCACCCGCAGTTGAGATCTACCCTTTTACGCCGGATG--CGTTTA ToLCMV GA------AGTAAGAACAGCCGCACGGTAGATCAACTCGTCGACGTCTGGTC--CCCTT- PaLCV GA------AATATGAACATCCACAAGGGAGATCAACACGACGACGTCTGTTC--CTCTT- ToLCKV GA------AGTAAGAACAGCCGCACGGTAGATCAACTCGTCGACGTCTGGTC--CCCTT- ToLCBDV AA------AGTATGAACATCCACAAGGGAGATCAACACGACGACGCCTGGTC--CCCTT- CLCuFV-Fai GA------AGTACGAACACCCACAAGGGAGATCAACTCTCCGACGTCTGGTC--CCCTT- CLCuFV-[72b] GA------AGTACGAACACCCACAAGGGAGATCAACTCTCCGACGTCTGGTC--CCCTT- CLCuFV-[806b] GA------AGTACGAACACCCACAAGGGAGATCAACTCTCCGACGTCTGGTC--CCCTT- ToLCBV GA------AGTATGAACAGCCGCACGCGAGATCAACTCGTCGACGCCTGGTC--CCCTT- ToLCBV-[Ban4] GA------AGTATGAACAGCCGCACGGTAGATCAACTCGTCGACGCCTGGTC--CCCTT- ToLCNdV-Mld ATAATATGT------ACACCCACACGGGAGATCAACTCGCCTCCTGAGAATGCTCTCCTT ToLCNdV-[Luf] ATAATACGG-----TGCACCCACACTGCAAATCAACTCGCCTCCTGCGAGTGCTCTTCTT ToLCNdV-Svr GTAATACGA------ACAACCACACGGTAGATCAACTCGCCTCCTGCGAATGCTCTTCTT ToLCNdV-[Lu] GTAATACGA------ACAACCACACGGAAGATCAACTCGCCTCCTGCGAATGCTCTTCTT SLCCV GTAATACGA------GCATCCGCACGGTAGATCAATTCGTCTGCGTCTGATGTTCTTCTT TYLCTHV-[1] GA------AGTACGAACATCCACAAGGTAGATCAACTCTCCGTCGTCTGGTTG---TCCT TYLCTHV-[2] TATGCACAAGTACGAACATCCACAAGGTTGATCAACTCTCCGTCGTCTGGTTG---TCCT TbLCCNV GA------AGTAAGAACAACCACAAGGTAGATCAACCCGTCGTCGTCTGGTTG---TCTT ToLCTWV AT------AATAAGAGCACCCACAAGGAAGATCAACCCTCCGCCTGCGAATTGGTCTCTT PepLCV GA------AATATGAACACCCACAAGGGAGATCAACTCGTCTTCGTCTAGTTG---TCTT TbLCJV GA-----AGATA-GAACACCCGCAGTTTAGATCAATCCTCCTCCTGCGGTTCTTCTTCTT ToLCV-D1 GGT-----AGTAAGAACACCCGCACGTCAAGTCAATTCTCTTCCTCCGGATGGACCTCTT ToLCV-A1 GGT-----AGTAAGAACACCCGCACGGCAAGTCAATTCTCTTCCTCCGGATGGACCTCTT ToLCV GGT-----AGTAAGAACACCCGCACGGCAAATCAATTCTCTTCCTCCGGATGGACCTCTT AYVV GT------AGTATGAACACCCGCACGTTAGATCAACTCTACGCCTGCGAACTGGCCTCCT ToLCLV GA------AGTATGAGCATCCACAGGGAAGATCAACTCTACGTCTGCGAATTGGCCTCTT [ 1681 1740] RANDOM CATCTTGTAACTAATAGGCTTCACAT--ATTTACATTTTAGT----TTGTCCTTCGAAAA CLCuMV-[62] ---CTTCGCTTCCCTGTGCTGTACTTTGATTGGTACCTGAGTACAGGGGTCCTTCGAGAG CLCuMV-[26] ---CTTCGCTTCCCTGTGCTGTACTTTGATTGGTACCTGAGTACAGGGGTCCTTCGAGAG CLCuMV-Fai2 ---CTTCGCTTCCCTGTGCTGTACTTTGATTGGTACCTGAGTACAGGGGTCCTTCGAGAG CLCuMV-Fai1 ---CTTCGCTTCCCTGTGCTGTACTTTGATTGGAAGCTGAGTACAGTGGTCCTTCGAGAG CLCuMV-Mul ---CTTCGCTTCCCTGTGCTGTACTTTGATTGGTACCTGAGTACAGGGGTCTATCAAGTG CLCuMV-Ok ---CTTCGCTTCCCTGTGCTGTACTTTGATTGGTACCTGAGTACAGGGGTCCTTCAAGTG OYVMV-201 ---CTTCGCTTCCCTGTGCTGTACTTTGATTGGTACCTGAGTACAACGGTTGGGTGAGAA OYVMFV-[Ind] ---CTTCGCTTCCTTGTGTTGAACTTTGATTGGTACCCGAGTACAACGGTTGGGTGAGAA OYVMFV-[301] ---CTTCGCTTCCCTGTGTTGAACTTTGATTGGTACCGGAGTAGAGCGGTTGGGTGAGAA CLCuLV-[802a] ---CTTGGCCTCCCTGTGCTGGACTTTGATGGGCAATTGAGTACAGTGGTTCCTCGAGGG CLCuLV-[804a] ---CTTGGCCTCCCTGTGCTGGACTTTGATGGGCAATTGAGTACAGTGGTTCCTCGAGGG ICMV CG-CTTAGCAGCTCTGTGTTGGACCTTGATTGGTACCTGAGTATAGTGGTCCTTCGAGGG ToLCMV ---CTTGGCTAGCCTGTGCTGCACTTTGATTGGTACCTGAGTAGAGTGGGCCTTCGAGGG PaLCV ---CTTGGCTAGCCTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGGGCCTTCGAGGG ToLCKV ---CTTGGCTAGCCTGTGCTGCACTTTGATTGGTACCTGAGTAGAGTGGGCCCTCGGGGG ToLCBDV ---CTTGGCTATCTTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGCGCCTTCGAGGG CLCuFV-Fai ---CTTGGCTAGCCTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGGGCTCTCGAGGG CLCuFV-[72b] ---CTTGGCTAGCCTGTGCTGCGCTTTGATTGGAACCAGAGTAGAGTGGGCTCTCGAGGG CLCuFV-[806b] ---CTTGGCTAGCCTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGGGCTCTCGAGGG ToLCBV ---CTTGGCTAGGCTGTGTTGCACTTTGATTGGAACCTGAGTAGAGTGGCCCTTCGAGGG ToLCBV-[Ban4] ---CTTGGCTAACCTGTGTTGCACTTTGATTGGAACCTGAGTAGAATGGTTCTTCGAGGG ToLCNdV-Mld CTTCTT--CTGTG-GGAGCGATGTTTT---CGCGACCGGAATAGAGTGGCTCCTCGAGTG ToLCNdV-[Luf] CTTCTT--CTGTG-GGAGCGATGTTTT---CGCGACCGGAATAGAGTGGTTCTTCGAGTG ToLCNdV-Svr CTTCTT--CTGGG-AGAGCGATGTTTT---CGCGACCGGAATAGAGTGGTTCTTCGAGTG ToLCNdV-[Lu] CTTCTT--CTGGG-GGAGCGATGTTTT---CGCGACCGGAATAGAGTGGTTCTTCGAGTG SLCCV CTTCTT--CTGCG-GTTGCGATGCTTT---CGCGACCGGAATACAGTGGTTCTTCGATTG TYLCTHV-[1] C---TTGGCTATTCGGTGTTGCACCTTGATAGGTACCTGAGTAGAGTGGGCCTTCGAGGG TYLCTHV-[2] C---TTGGCTATTCGGTGTTGCACCTTGATAGGTACCTGAGTACAGTGGGCCTTCGAGGG TbLCCNV C---TTGGCGATTCGGTGTTGCACCTTGATAGGAACCTGAGTAGAGTGGCCCGTTGAGGG ToLCTWV C---TTCGCTATTTTGTGTTGGACCTTGATTGGCACGTGAGTAGAGTGGCTCGGTGAGGG PepLCV C---TTGGCGATTCTGTGTCGCACCTTGATGGGAACCTGAGAAGAGTGGGCCTTCGATGG TbLCJV CGATTTGGCTATCCTGTGCTGGACTTTGATGGGAACCTGAATAGAGTGGGCTGTAGAGGG ToLCV-D1 C---TTCGCTATTTTGTGTTGGACCTTGATAGGTACCTGAGTACAACGGCTCGTTGAGGG ToLCV-A1 C---TTCGCTATTTTGTGTTGGACCTTGATAGGTACCTGAGTACAACGGCTCGTCGAAGG ToLCV C---TTCGCTATTTTGTGTTGGACCTTGATAGGTACCTGAGTATAGTGGCTCGTTGAGGG AYVV C---TTCGCTATTCTGTGCTGCACTTTGATTGGTACCTGAGTACAATGGCCTCTCGAGGG ToLCLV C---TTGGCTATTCTGTGCTTGACTTTGATGGGTACCTGAGTACAGTGGCTCCGTGAGGG [ 1741 1800] RANDOM --AAGATAGCGAGATTCT-----GTTTCGGGATTAATCATAGGGATACTAATCATATTGA CLCuMV-[62] TGATGAAGATCGCATTCTTTACTGCCCAGTTTTTTAGTGCGGTGTTCTTTTCCTCGTCTA CLCuMV-[26] TGATGAAGATCGCATTCTTTACTGCCCAGTTTTTTAGTGCGGTGTTCTTTTCCTCGTCTA CLCuMV-Fai2 TGATGAAGATCGCATTCTTCACTGCCCAGTTTTTTAGTGCGGTGTTCTTTTCCTCGTCTA CLCuMV-Fai1 TGATGAAGATTGCATTTTTTAAGGCCCAATTCTTTAATGCTGAGTTTTTTTCCTCGTTGA CLCuMV-Mul TGATGAAGATCGCATTCTTTACTGCCCAGTTCTTTAGTGCGGTGTTCTTTTCCTCGTCTA CLCuMV-Ok TGATGAAGATCGCATTTTTTACTGCCCAGTTTTTTAGTGCGGTGTTCTTTTCCTCGTCTA OYVMV-201 AGACGAATGCTGCATTTTTTAAAGCCCACGCTTTCAAAGCTGAGTTCTTTTCCTCGTCCA OYVMFV-[Ind] AGACGAATGCTGCATTTTTTAAAGCCCACGCTTTCAAAGCTGAGTTCTTTTCCTCGTCTA OYVMFV-[301] AGACGAATGTTGCATTTTTTAAAGTCCACGCTTTCAAAGCTGAGTTCTTTTCCTCGTCCA CLCuLV-[802a] TGATGAAGACTGCATTCTTAACTGCCCAGTTTTTTAGGGCTTGGTTCTTTTCCTCGTCCA CLCuLV-[804a] TGATGAAGACTGCATTCTTAACTGCCCAGTTTTTTAGGGCTTGGTTCTTTTCCTCGTCCA ICMV AGATGAAGGTCGCATTTTTCAGAGCCCAGGCTTTTAATGCGCTATTCTTTTCCTCGTCCA ToLCMV TGACGAAGGTCGCATTCTTTATAGCCCAGAATTTTAGTTTAGAATTCTTTTCTTCATCCA PaLCV TGACGAAGATCGCATTCTTTAAAGCCCAATTTTTCAGTGCGTTATTTTTCTCTTCGTCCA ToLCKV TGACGAAGGTCGCATTCTTTATAGCCCAGTTTTTTAGTTTAGAATTCTTTTCTTCATCCA ToLCBDV TGACGAAGATCGCATTCTTTAAAGCCCAATTCTTGAGTGCAGCATTCTTCTCTTCATCCA CLCuFV-Fai TGATGAAGATTGCATTCTTTAAAGCCCAATTTTTGAGTGCAGAATTCTTCTCTTCATCCA CLCuFV-[72b] TGATGAAGATTGCATTCTTTAAAGCCCAATTTTTGAGTGCAGAATTCTTCTCTTCATCCA CLCuFV-[806b] TGATGAAGATTGCATTCTTTAAAGCCCAATTTTTGAGTGCAGAATTCTTCTCTTCATCCA ToLCBV TGATGAAGGTTGCATTTTTTAGAGCCCACTGCTTTAGTGCGTTATTCTTGTCTTCGTCCA ToLCBV-[Ban4] TGATGAATCTCGCATTTTTAAGAGTCCACTGCTTTAGTGCGTTGTTCTTGTCCTCGTCCA ToLCNdV-Mld TGATGAAGACTGCATTCTTGATTGCCCACTGTTTCAGTGCTGCATTTTTCTCTTCGACCA ToLCNdV-[Luf] TGATGAAGACTGCATTTTTGATTGCCCACTGCTTCAGTGCTGCATTTTTTTCTTCGTCCA ToLCNdV-Svr TGATGAAGACTGCATTCTTGATTGCCCACTGCTTCAGTGCTGCATTTTTTTCTTCATCCA ToLCNdV-[Lu] TGATGAAGACTGCATTCTTGATTACCCACTGCTTCAGTGCTGCATTCTTCTCTTCGTTCA SLCCV TGATGAAGATTGCATTCTTTAATGCCCACTGCTTTAGTGCTGCATTCTTTTCTTCATCGA TYLCTHV-[1] TGACGAAGATCGCATTTTTTATAGCCCAGTTTCTAAGTGCGGAGTTCTTTTCCTCTTCCA TYLCTHV-[2] TGACGAAGATCGCATTTTTTATAGCCCAGTTTCTAAGTGCGGAGTTCTTTTCCTCTTCCA TbLCCNV AGACGAAGATCGCATTCTTTACAGCCCAGTTTCGAAGTGCTGAGTTCTTTTCTTCTTCCA ToLCTWV TGATGAATTCCGCATTCTTTAAAGCCCAGTCTTTGAGTGCGAAATTCTTTTCTTCGTCTA PepLCV TGACGAAGATTGCATTCTTTAGAGCCCAATTTTTAAGTGCGGTGTTCTTTTCCTCTTCCA TbLCJV TGACGAAGGTTGCATTTTTAACTGCCCAGGCTTTTAATGCGGAATTCTTTTCTTCGTCCA ToLCV-D1 TGATGAATTCTGCATTTTTTAAAGCCCAGGCTTTTAATGCGCTGTTTTTCTCCTCATCGA ToLCV-A1 TGATGAATTCTGCATTTTTTAAAGCCCAGGCTTTTAATGCGCTGTTCTTTTCCTCATCGA ToLCV TGATGAATTCTGCATTTTTTAAAGCCCAGGCTTTTAATGCGCTGTTTTTCTCCTCATCGA AYVV TGACGAATTCCGCATTCTTTATAGCCCACTCTTTTAATGCTGAATTCTTTTCTTCGTCCA ToLCLV TGATGAATTCTGCATTCTTTACTGCCCAGTCTTTTAATGCTGAATTCTTTTCCTCGTCCA [ 1801 1860] RANDOM AAAA---TCAGGGGTTGAAAGGTAGTTTGCGGTTGGCTAGCCAAACAA--GGGATGCCAA CLCuMV-[62] GGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTTGGTATCCCGC CLCuMV-[26] GGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTTGGTATCCCGC CLCuMV-Fai2 GGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTTGGTATCCCGC CLCuMV-Fai1 GGAATTCCTTATACCTCCTGTTCGGACCAGGATTGCAGAGGAAGATTGTCGGTATCCCGC CLCuMV-Mul GGAATTCTTTATAACTGCTGTTTGGACCAGGATTGCAGAGGAAGATTGTTGGTATCCCAC CLCuMV-Ok GGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTTGGTATCCCGC OYVMV-201 GATACTCTTTATAGCTAGCGTTGGGCCCAGGATTGCAGAGGAAGATTGTTGGTATTCCAC OYVMFV-[Ind] AAAACTCTTTATAGCTTGCGTTGGGGCCTGGATTGCAGAGGAAGATTGTTGGAATGCCTC OYVMFV-[301] AGAACTCCTTATAGCTAGCGTTGGGGCCTGGATTGCAGAGGAAGATTGTTGGAATGCCTC CLCuLV-[802a] GATATTCTTTATAAGATGAGTTTGGCCCAGGATTGCAGAGGAAGATTGTGGGTATTCCAC CLCuLV-[804a] GATATTCTTTATAAGATGAGTTTGGCCCAGGATTGCAGAGGAAGATTGTGGGTATTCCAC ICMV GGAATTCTTTATAGCTGGAATTGGGGCCTGGATTGCAGAGGAAGATAGTGGGAATACCTC ToLCMV AGAATTCTTTATAGCTGGAGTTGGGTCCTGGATTGCAGAGGAAGATTGTGGGAATTCCGC PaLCV AGAACTCTTTATAGCTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGTATTCCTC ToLCKV AGAATTCTTTATAGCTGGAGTTGGGTCCTGGATTGCAGAGGAAGATTGTGGGAATTCCGC ToLCBDV AGAACTCTTTATAACTTGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGC CLCuFV-Fai AAAACTCTTTATAGCTTGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGC CLCuFV-[72b] AAAACTCTTTATAGCTTGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGC CLCuFV-[806b] AAAACTCTTTATAGCTTGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGC ToLCBV GAAATTCTTTATAACTGCTGTTAGGTCCTGGATTGCAGAGAAAGATAGTGGGAATGCCTC ToLCBV-[Ban4] GAAATTCTTTATAGCTGCTGTTAGGCCCTGGATTGCAGAGGAAGATAATGGGAATGCCTC ToLCNdV-Mld GATATTCCTTATAGCTGCTGGGTGGACCTTTATTGCACAGGAAGATAGTGGGAATTCCAC ToLCNdV-[Luf] GATATTCCTTATAGCTGCTATTTGGACCTGGATTGCACAGGAAGATAGTGGGAATTCCTC ToLCNdV-Svr GATATTCCTTATAGCTGCTGTTTGGACCTTTATTGCACAGGAAGATAGTGGGAATTCCAC ToLCNdV-[Lu] GATATTCCTTATAGCTGCTGTTCGGACCTTTATTGCACAGGAAGATAGTGGGAATTCCAC SLCCV GACATTCTTTGTAACTGCTGTTTGGGCCTTTATTGCGGAGGAAGATGGTGGGAATTCCAC TYLCTHV-[1] AGTACTCTTTATAGCTGGAGTTTGGTCCAGGATTGCAGAGGAAGATAGTGGGAATTCCGC TYLCTHV-[2] AGTACTCTTTATAGCTGGAGTTTGGTCCAGGATTGCAGAGGAAGATAGTGGGAATTCCGC TbLCCNV GATACTCTTTATAGCTGGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGGATCCCGC ToLCTWV AGTACTCTTTATATGATGATGTTGGCCCTGGATTGCAAAGGAAGATTGTTGGGATACCAC PepLCV AGAACTCTTTATAGCTTGAATGTGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGC TbLCJV GAAATTCCGTATATGAAGACGTTGGACCTGGATTGCAGAGGAAGATTGTTGGGATTCCAC ToLCV-D1 GGTACTCTTTATAGCTGGAGTTGGGTCCTGGATTGCAGAGGAAGATTGTGGGTATTCCAC ToLCV-A1 GGTACTCTTTATAGCTGGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCAC ToLCV GGTACTCTTTATAGCTGGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGTATTCCAC AYVV AGTACTCTTTATATGATGATGTTGGCCCTGGATTGCAAAGGAAGATAGTTGGGATTCCAC ToLCLV AGTACTCTTTATACGATGATGTTGGGCCTGGATTGCAGAGGAAGATTGTTGGGATCCCAC [ 1861 1920] RANDOM CCACGGTCAATGCCCTCAGACCACGGTCAATGCC-CTCAGTCGATGGC--TAG--CCAAA CLCuMV-[62] CTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCA CLCuMV-[26] CTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCA CLCuMV-Fai2 CTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCA CLCuMV-Fai1 CTTTAATTTGAACAGCCTTTCCGTATTTTGTGTTGGCCTGCCAGTCTCTTTGGCCCCCCA CLCuMV-Mul CTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCA CLCuMV-Ok CTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCA OYVMV-201 CTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCA OYVMFV-[Ind] CTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTGCCAGTCCCTTTGGGCCCCCA OYVMFV-[301] CTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTGCCAGTCTCTTTGGGCCCCCA CLCuLV-[802a] CTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTGCCAGTCCCTTTGGGCCCCCA CLCuLV-[804a] CTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTGCCAGTCCCTTTGGGCCCCCA ICMV CTTTAATTTGAACTGGCTTACCGTACTTGGTGTTTGATTGCCAGTCC-TCTGGGCCCCCA ToLCMV CTTTAATTTGAACTGGCTTATTGTACTTTCTATTTGATTGCCAGTCCCTTTGGGCCCCCA PaLCV CTTTAATTTGAACTGGCTTTCCGTACTTTGTATTTGATTGCCAGTCCCTTTGGGCCCCCA ToLCKV CTTTAATTTGAACTGGCTTATTGTACTTTCTATTTGATTGCCAGTCCCTTTGGGCCCCCA ToLCBDV CTTTAATTTGAACTGGCTTTCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGCCCCCA CLCuFV-Fai CTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCTTTTGGGCCCCCA CLCuFV-[72b] CTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCTTTTGGGCCCCCA CLCuFV-[806b] CTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCTTTTGGGCCCCCA ToLCBV CTTTAATTTGAACTGGCTTTCCGTATTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCA ToLCBV-[Ban4] CTTTAATTTGAACTGGCTTTCCGTATTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCA ToLCNdV-Mld CTTTAATCATGACTGGCTTTCCGTACTTGGTGTTGCTTTGCCAGTCACGCTGGGCCCCCA ToLCNdV-[Luf] CTTTAATCTGGACAGGCTTTCCGTACTTCGTGTTGCTTTGCCAGACACGCTGGGCCCCCA ToLCNdV-Svr CTTTAATCATGACCGGCTTTCCGTACTTCGTGTTGCTTTGGCAGTCACGCTGGGCCCCCA ToLCNdV-[Lu] CTTTAATCATGACCGGCTTTCCGTACTTCGTGTTGCTTTGGCAGTCACGCTGGGCCCCCA SLCCV CTTTAATCATGACTGGCTTTCCGTACTTCGTGTTGCTTTGCCAGTCTCTCTGGGCCCCCA TYLCTHV-[1] CTTTAATTTGAACTGGTTTGCCGTATTTGGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCA TYLCTHV-[2] CTTTAATTTGAACTGGTTTGCCGTATTTGGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCA TbLCCNV CTTTAATTTGAACTGGTTTCCCGTACTTGGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCA ToLCTWV CTTTAATTTGAATTGGTTTCCCGTATTTGGTGTCGCTTTGCCAGTCCCTTTGGGCCCCCA PepLCV CTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTGCTTTGCCAGTCTCTTTGGGCCCCCA TbLCJV CTTTAATTTGAATTGGCTTCCCGTACTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCA ToLCV-D1 CTTTAATTTGAACTGGCTTGCCGTATTTGGTGTTGCTTTGCCAATCTCTCTGGGCCCCCA ToLCV-A1 CTTTAATTTGAACTGGTTTGCCGTACTTGGTGTTGCTTTGCCAGTCTCGCTGGGCCCCCA ToLCV CTTTAATTTGAACTGGCTTGCCGTACTTGGTGTTGCTTTGCCAATCTCTCTGGGCCCCCA AYVV CTTTAATTTGAATTGGTTTCCCGTATTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCA ToLCLV CTTTAATTTGCATGGGCTTCCCGTACTTTGTGTTGCTTTGCCAATCTCTTTGGGCCCCCA [ 1921 1980] RANDOM CAAGCAGG---GCACAGCTCTAGGTTGATTAGGCCCGCGCTTCCATTACTGGTTGCAGCC CLCuMV-[62] TGAACTCTTT-AAAGTGTTTGAGGAAATGCGGGTCGACGTCATCAATGACG-TTATA-CC CLCuMV-[26] TGAACTCTTT-AAAGTGTTTGAGGAAATGCGGGTCGACGTCATCAATGACG-TTATA-CC CLCuMV-Fai2 TGAACTCTTT-AAAGTGTTTGAGGAAATGCGGGTCGACGTCATCAATGACG-TTATA-CC CLCuMV-Fai1 TGAACTCTTT-AAAGTGTTTGAGGAAATGCGGGTCGACGTCATCAATGACG-TTGTA-CC CLCuMV-Mul TGAACTCTTT-AAAGTGTTTGAGGAAATGCGGGTCGACGTCATCAATGACA-TTATA-CC CLCuMV-Ok TGAACTCTTT-AAAGTGTTTGAGGAAATGCGGGTCGACGTCATTAATGACG-TTATA-CC OYVMV-201 TGAACTCTTT-AAAGTGCTTGAGGAAGTGCGGATCTACGCCATCAATGACG-TTATA-CC OYVMFV-[Ind] TGAATTCTTT-AAAGTGTTTCAGATAATGCGGGTCAACATCATCTATAATG-TTGAA-CC OYVMFV-[301] TGAATTCTTT-AAAGTGTTTCAGATAATGCGGGTCAACATCATCTATAATG-TTGAA-CC CLCuLV-[802a] TGAACTCTTT-AAAGTGCTTGAGGAAGTGCGGATCGACATCATCAATGACG-TTATA-CC CLCuLV-[804a] TGAACTCTTT-AAAGTGCTTGAGGAAGTGCGGATCGACATCATCAATGACG-TTATA-CC ICMV TGAATTCTTTTGAAGTGCTTTAGGTAGTGGGGATCGACGTCATCAATGACG-TTGTA-CC ToLCMV TGAATTCCTT-AAAGTGCTTTAGGTAGTTGGGGTCTACGTCATCAATTACG-TTATA-CC PaLCV TGAATTCCTT-AAAGTGCTTTAAATAATGCGGATCGACGTCATCAATGACG-TTGTA-CC ToLCKV TGAATTCCTT-AAAGTGCTTTAGGTAGTTGGGGTCTACGTCATCAATTACG-TTATA-CC ToLCBDV TGAATTCCTT-AAAGTGCTTTAGGTAGTGGGGATCGACGTCATCTATGATG-TTGAA-CC CLCuFV-Fai TGAACTCCTT-AAAGTGCTTTAGGTAATGCGGGTCGACGTCATCAATGACG-TTAAA-CC CLCuFV-[72b] TGAACTCCTT-AAAGTGCTTTAGGTAATGCGGGTCGACGTCATCAATGACG-TTAAA-CC CLCuFV-[806b] TGAACTCCTT-AAAGTGCTTTAGGTAATGCGGGTCGACGTCATCAATGACG-TTAAA-CC ToLCBV TGAACTCTTT-AAAGTGTTTCAGATAATGCGGATCGACGTCATCAATGACG-TTGTA-CC ToLCBV-[Ban4] TGAACTCTTT-AAAGTGTTTCAGATAATGCGGATCGACGTCATCAATGACG-TTGTA-CC ToLCNdV-Mld TGAATTC-TTTAAAGTGCTTTAGATAGTGGGGATCAACGTCATCAATGACG-TTGTA-CC ToLCNdV-[Luf] TGAATTC-TTTAAAGTGCTTTAGATAGTGCGGATCAACGTCATCAATGACG-TTGTA-CC ToLCNdV-Svr TGAATTC-TTTAAAGTGCTTTAGATAGTGGGGATCAACGTCATCAATGACG-TTGTA-CC ToLCNdV-[Lu] TGAATAC-TTTAAAGTGCTTTAGATAGAGGGGATCAACGTCATCAATGACG-TTGTA-CC SLCCV TGAATTC-TTTAAAATGCTTTAGATAGTGTGGATCAACGTCATCAATGACG-TTGTA-CC TYLCTHV-[1] TGAACTC-TTTAAAGTGTTTTAGATAATGCGGATCGACGTCATCGATGACG-TTGAA-CC TYLCTHV-[2] TGAACTC-TTTAAAGTGTTTTAGATAATGCGGATCGACGTCATCGATGACG-TTGAA-CC TbLCCNV TGAATTC-TTTAAAGTGCTTTAGATAATGCGGATCTACGTCATCAATGACG-TTGAA-CC ToLCTWV TGAATTC-TTTAAAGTGCTTTAGATAGTGGGGATCGACGTCATCAATGACG-TTGTA-CC PepLCV TGAATTC-TTTAAAATGCTTTAAGTAATGCGGATCGACGTCATCAATGACG-TTATA-CC TbLCJV TGAATTC-TTTAAAATGCTTTAGATAGTGGGGGTCTACATCATCAACGACG-TTGTA-CC ToLCV-D1 TGAATTC-TTTGAAATGTTTCAGATAATGCGGATCAACGTCATCAATGACG-TTATA-CC ToLCV-A1 TGAATTC-TTTGAAATGTTTCAAATAATGCGGGTCCACGTCATCAATGACG-TTATA-CC ToLCV TGAATTC-TTTGAAATGTTTCAGATAATGCGGATCAACGTCATCAATGACG-TTATA-CC AYVV TGAATTC-TTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACG-TTATA-CC ToLCLV TGAATTC-TTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACG-TTGTA-CC [ 1981 2040] RANDOM TCAGGGCACAGCTCTAGG--TTAGAGC---GTTTTATACCCCCCTCCACCTGGCCCTCGA CLCuMV-[62] AGGCGTCGTTACTGTAGACCTTGGGACTCAGATCCAGATGTCCGCACAAATAGTTATGTG CLCuMV-[26] AGGCGTCGTTACTGTAGACCTTGGGACTCAGATCCAGATGTCCGCACAAATAGTCATGTG CLCuMV-Fai2 AGGCGTCGTTACTGTAGACCTTGGGACTCAGATCCAGATGTCCGCACAAATAGTTATGTG CLCuMV-Fai1 AGGCGTCGTTACTGAATACTTTGGGACTCAGGTCCAGATGTCCGCTCAAATAGTTATGTG CLCuMV-Mul AGGCGTCGTTACTGTAGACCTTGGGACTCAGGTCCAGATGTCCACACAAATAGTTATGTG CLCuMV-Ok AGGCGTCGTTACTGTAGACCTTGGGACTCAGGTCCAGATGTCCACACAAATAGTTATGTG OYVMV-201 AAGCGTCGTTACTGTACACCTTTGGGCTTAGATCTAGATGCCCACATAAATAATTATGTG OYVMFV-[Ind] ACGCATCGTTTGAATACACTTTAGGGCTTAGATCCAAGTGCCCACATAAATAATTATGTG OYVMFV-[301] ACGCATCGTTTGAATATACTTTAGGGCTTAGATCCAAGTGCCCACATAAATAATTATGTG CLCuLV-[802a] ACGCATCATTGCTGTAAACTTTGGGGCTTAAATCTAAATGACCGCATAAGTAATTATGAG CLCuLV-[804a] ACGCATCATTGCTGTAAACTTTGGGGCTTAAATCTAAATGACCGCATAAGTAATTATGAG ICMV ATGCATCATTGTTGTAGACCTTAGGACTTAAATCCAGGTGTCCACATAGGTAATTATGTG ToLCMV ACGCATCATTACTGTAGACCTTTGGGCTAAGGTCTAGATGACCACACAAATAATTATGTG PaLCV AGGCATCATTATTGTAGACCTTAGGACTAAGGTCTAAGTGACCACACAGATAATTATGTG ToLCKV ACGCATCATTACTGTAGACCTTTGGGCTAAGGTCTAGATGACCACACAAATAATTATGTG ToLCBDV AGGCCTCATTATTGTACACCTTTGGGCTAAGGTCTAGATGACCACACAAATAGTTATGCG CLCuFV-Fai AGGCGTCATTACTGTATACCCTTGGGCTCAGATCTAGATGTCCACACAGATAATTATGTG CLCuFV-[72b] AGGCGTCATTACTGTATACCCTTGGGCTCAGATTTAGATGTCCACACAGATAATTATGTG CLCuFV-[806b] AGGCGTCATTACTGTATACCCTTGGGCTCAGATCTAGATGTCCACACAGATAATTATGTG ToLCBV ACGCATCATTTGAGTACACTCGTGGGCTCAAGTCCAAATGACCGCATAGATAATTATGCG ToLCBV-[Ban4] ACGCATCATTTGAGTACACTCTTGGGCTTAAGTCCAAATGCCCGCATAGATAATTATGCG ToLCNdV-Mld AGGCATCATTGCTATACACCTTTGGGCTCAGATCAAGATGTCCACACAAGTAATTGTGGG ToLCNdV-[Luf] AGGCATCATTGCTATACACCTTTGGGCTCAGATCTAGATGTCCACACAAGTAATTGTGTG ToLCNdV-Svr AGGCATCATTGCTATAGACCTTTGGGCTCAGATCAAGATGTCCACACAAGTAATTGTGTG ToLCNdV-[Lu] AAGCATCATTGCTATACACCTTTGGGCTCAGATCTAGATGTCCACACAAGTAATTGTGTG SLCCV AAGCATCATTATTGTACACTCTAGGGCTTAGATCCAGATGGCCGCACAAGTAATTGTGTG TYLCTHV-[1] ACGCATCATTATTATACACTTTTGGACTTAAATCTAAATGGCCACACAGATAATTATGTG TYLCTHV-[2] ACGCATCATTATTATACACTTTTGGACTTAAATCTAAATGGCCACACAGATAATTATGTG TbLCCNV AAGCATCATTACTGTACACCTTTGGACTCAGATCCAAATGACCACACAAGTAATTATGTG ToLCTWV ATGCCTCATTGTTGTAGACTCTTGGGCTTAGGTCAAGATGACCACACAAGTAATTGTGTG PepLCV AAGGGTCGTTGTTGTACACTTTTGGGCTTAAGTCTAAATGACCACATAAATAGTTATGTG TbLCJV ATGCGTCGTTGCTGTAGATCTTCGGACTCAGATCCAGATGACCGCATAGGTAGTTATGTG ToLCV-D1 ACGCATCATTTGAGTACACTTTAGGGCTTAAATCAAGGTGCCCACATAAATAATTATGTG ToLCV-A1 ATGCATCATTTGAATATACTTTAGGGCTCAAATCAAGGTGCCCACATAAATAATTATGGG ToLCV ACGCATCATTTGAATACACTTTAGGGCTTAAATCAAGGTGCCCACATAAATAATTATGTG AYVV AAGCATCATTACTGTATACTTTTGGACTCAGATCTAGATGACCGCACAAATAATTATGTG ToLCLV ATGCATCATTACTGTACACCTTTGGACTCAAGTCAAGGTGCCCACACAAATAATTATGTG [ 2041 2100] RANDOM CGCTCAAGACTGCGATTAGGCCCGCGCTTCCATTACTGGTTGCAGCCTCAG--GGCACAG CLCuMV-[62] GTCCCAGTGATCTAGCCCACATCGTCTTTCCCGTTCGACTATCTCCTTCAATTACTATAC CLCuMV-[26] GTCCCAGTGATCTAGCCCACATCGTCTTTCCCGTTCGACTATCTCCTTCAATTACTATAC CLCuMV-Fai2 GTCCCAGTGATCTAGCCCACATCGTCTTTCCCGTTCGACTATCTCCTTCAATTACTATAC CLCuMV-Fai1 GTCCCAATGATCTAGCCCACATCGTCTTTCCCGTTCGACTATCTCCCTCAATTACTATAC CLCuMV-Mul GTCCCAATGACCTAGCCCACATCGTCTTCCCCGTACGACTATCTCCTTCAATCACTATAC CLCuMV-Ok GTCCCAGTGATCTAGCCCACATCGTCTTCCCCGTTCGACTATCTCCTTCAATTACTATAC OYVMV-201 GGCCTAAAGACCTAGCCCACATTGTCTTCCCAGTACGACTATCACCCTCAATTACTATAC OYVMFV-[Ind] GCCCCAAGGAACGGGCCCATTGTGTTTTCCCAGTTCTAGACTCCCCCTCTAGAACTAAAC OYVMFV-[301] GCCCCAAGGAACGGGCCCATTGTGTTTTTCCAGTTCTAGACTCCCCCTCTAGAACTAAAC CLCuLV-[802a] GCCCTAATGACCTAGCCCACATCGTTTTACCCGTACGACTGTCTCCCTCAATCACTATAC CLCuLV-[804a] GCCCTAATGACCTAGCCCACATTGTTTTACCCGTACGACTGTCTCCCTCAATCACTATAC ICMV GACCCAATGCACGGGACCACATGGTCTTGCCCGTCCGACTATCGCCTTCGATTACGATTG ToLCMV GTCCCAGTGATCTGGCCCACATAGTCTTGCCGGTCCTACTGTCACCCTCAATCACTATAC PaLCV GACCCAAAGACCTAGCCCACATCGTCTTTCCTGTTCTACTATCACCCTCTATGACAATAC ToLCKV GTCCCAGTGATCTGGCCCACATTGTTTTCCCCGTCCTACTGTCACCCTCAATCACTATAC ToLCBDV GTCCCAGTGATCTGGCCCACATCGTCTTCCCCGTTCGACTATCACCCTCTATCACTATAC CLCuFV-Fai GACCTAATGATCTGGCCCACATCGTCTTCCCCGTCCTACTGTCACCCTCAATCACTACAC CLCuFV-[72b] GACCTAATGATCTGGCCCACATCGTCTTCCCCGTCCTACTGTCACCCTCAATCACTACAC CLCuFV-[806b] GACCTAATGATCTGGCCCACATCGTCTTCCCCGTCCTACTGTCACCCTCAATCACTACAC ToLCBV GGCCTAAAGACCTAGCCCACATGGTTTTGCCCGTACGACTATCACCTTCAATAACAATAC ToLCBV-[Ban4] GGCCTAAAGACCTAGCCCACATAGTTTTGCCCGTACGACTATCACCCTCAATAACAATAC ToLCNdV-Mld GTCCTAAGCATCGAGCCCACATTGTTTTGCCCGTTCTACTATCCCCCTCAATGACTATGC ToLCNdV-[Luf] GGCCTAAGCACCGAGCCCACATTGTCTTCCCAGTTCTACTATCCCCCTCTATTACTATGC ToLCNdV-Svr GTCCTAAGCACCGAGCCCACATCGTTTTGCCCGTCCTACTATCCCCCTCTATGACTATGC ToLCNdV-[Lu] GTCCTAAGCAACGAGCCCACATTGTTTTGCCCGTCCTACTATCCCCCTCTATGACTACAC SLCCV GTCCTAAAGAACGCGCCCACGCAGTTTTGCCCGTTCTACTATCACCCTCTAAAACTATTC TYLCTHV-[1] GTCCCAATGACCTAGCCCACATCGTCTTCCCTGTTCTGCTATCACCCTCAATGACTATAC TYLCTHV-[2] GTCCCAATGACCTAGCCCACATCGTCTTCCCTGTTCTGCTATCACCCTCAATGACTATAG TbLCCNV GTCCTAATGACCTGGCCCACATCGTCTTCCCCGTTCTACTATCACCCTCTATCACTATAC ToLCTWV GGCCTAGAGACCTGGCCCAAAGTGTCTTCCCTGTACGACTCTCTCCCTCTACCACAATAC PepLCV GTCCTAACGACCTGGCCCACATTGTTTTCCCCGTCCTGCTATCACCCTCTACCACTATAC TbLCJV GACCTAACGACCTAGCCCACATCGTTTTTCCTGTCCTACTGTCACCCTCTATGACAATAC ToLCV-D1 GACCCAATGAACGCGCCCAAACAGTCTTCCCTGTCCTAGACTCACCCTCTATTACTATAC ToLCV-A1 GGCCCAATGACCGCGCCCAAACAGTCTTCCCTGTCCTAGACTCACCCTCTATTACTATAC ToLCV GACCCAATGAACGCGCCCAAACAGTCTTCCCTGTTCTAGACTCACCCTCTATTACTATAC AYVV GTCCCAGTGACCTGGCCCACATTGTTTTACCAGTACGACTATCACCTTCTATCACAATAC ToLCLV GGCCTAAAGACCTGGCCCACATTGTCTTTCCTGTTCTGCTCTCTCCCTCGATGACTATAC [ 2101 2160] RANDOM CTCTAGGTTCTC--GGTCAGATTTCTA-GCCAAGTGCGTTTCGTGTTTTTCATGTGCTTG CLCuMV-[62] TCCGAGGTCTAAGGGGCCGCGCAGCGGGATCGACAACGTTATCGATGGCCCAAAC-TTCA CLCuMV-[26] TCCGAGGTCTAAGGGGCCGCGCAGCGGGATCGACAACGTTATCGATGGCCCAAAC-TTCA CLCuMV-Fai2 TTCGAGGTCTAAGGGGCCGCGCAGCGGGATCGACAACGTTATCGATGGCCCAAAC-TTCA CLCuMV-Fai1 TCCGAGGTCTAAGGGCCCGCGCAGCGGAATCGACAACGTTATCGATGGCCCAAAC-TTCA CLCuMV-Mul TTTGAGGTCTGTGTGGCCGCGCAGCGGCATCGACAACGTTTTGGGAGACCCACTC-TTCA CLCuMV-Ok TTCGAGGTCTAAGGGGCCGCGCAGCGGGATCGACAACGTTATCGATGGCCCAAAC-TTCA OYVMV-201 TTTGAGGTCTCAGGGGCCGCGCAGCGGCGTCGACAACATTCTCAGACACCCATTC-TTCA OYVMFV-[Ind] TCAAAGGTCTCTGAGGCCGCGCAGCGGCGTCCATGACGTTCTCCGACGCCCACTC-TTCA OYVMFV-[301] TCAATGGTCTCAGAGGCCGCGCAGCGGCACTGACGACGTTCTCGGCAGCCCATTC-CTCA CLCuLV-[802a] TTTGAGGCCTCAGAGGCCGCGCAGCGGCATCCATGACATTCTCGGAGACCCACTC-TTCA CLCuLV-[804a] TTTGAGGCCTCAGAGGCCGCGCAGCGGCATCCATGACATTCTCGGAGACCCACTC-TTCA ICMV ATTTTGGTCTCAAAGGCCGCGCA-CG--ACCCATCACGTTTTCGTGGAACCACTC-GTCG ToLCMV TTACGGGCCTCAAAGGC-GCGCACCTG-----ACGACGTTCTCGGCAGCCCACTC-TTCA PaLCV TCATGGGTCTCAAAGTCCGCGCAGCGGCACCCATTACATTCTCAACAGCCCATTC-TTCA ToLCKV TTACGGGCCTCAAAGGCCGCGCAGCGGCATTGACGACGTTCTCGGCAGCCCATTC-CTCA ToLCBDV TTATGGGTCTTAAAGGCCGCGCAGCGGCACTGACAACGTTCTCGGCAGCCCATTC-TTCA CLCuFV-Fai TTATTGGTCTATTGGCCCGCGCAGCGGCACTGACGACGTTCTCGGCAGCCCACAC-TTCA CLCuFV-[72b] TTATTGGTCTATTGGCCCGCGCAGCGGCACTGACGACGTTCTCGGCAGCCCACAC-TTCA CLCuFV-[806b] TTATTGGTCTATTGGCCCGCGCAGCGGCACTGACGACGTTCTCGGCAGCCCATAC-TTCA ToLCBV TTATGGGCCTAATAG--CG-GCAGCGGCATCCACAACATTTTCTGCAGCCCAATG-ATGG ToLCBV-[Ban4] TTATGGGCCTAATGGGCCGCGCAGCGGCATCGACAACATTTTCTGCAGCCCACTG-ATAG ToLCNdV-Mld TTATGGGCCTAAAAGGCCGCGCAGCGGCACACACAACATTGACACTGGCCCAATCGA-CA ToLCNdV-[Luf] TTATGGGCCTAAAAAGCCGCGCAGCGGCACAGACAACATTCGACGACACCCAATCGA-CG ToLCNdV-Svr TTATGGGCCTAAAAGGCCGCGCAGCGGCACACACAACATTAGACGAGACCCAATCGA-CG ToLCNdV-[Lu] TTATTGGTCTAAAAGGCCGCGCAGCGGCACACACAACATTCGACGTCACCCAATCGA-CG SLCCV CTATGGGTCTATTCGGCCGCGCAGCGGAACACCCCACGTTAACTGAAACCCAATCGA-CG TYLCTHV-[1] TTATTGGTCTCAATGGCCGCGCA-CG--ACTGAGAACATTATTACAAGCCCACTC-TTCA TYLCTHV-[2] TTATTGGTCTCAATGGCCGCGCA-CG--ACTGAGAACATTATTACAAGCCCACTC-TTCA TbLCCNV TTACCGGTCTTAAAGGCCGCGCAGCGGCACTCACAACATTATCGACCGCCCACTC-ATCA ToLCTWV TCATGGGTCTCCATGGCCGCGCAGCGGAATCCCTCACGTTCTCGGCAACCCATTC-TACA PepLCV TTATCGGTCTTAATGGCCGCGCA--GGC-TTGACAACGTTTGCAGCAACCCATTCATTTA TbLCJV TAATCGGTCTCCATGGCCGCGCAGAAG-ACT--TCACGTTTTCTGCAGCCCATTC-CTCA ToLCV-D1 TTATGGGTCTCAATGGCCGCGCAGCGGCATCCTTCACATTCTCGGCGACCCACTC-CTCC ToLCV-A1 TTATGGGTCTCAACGGCCGCGCAGCGGGATCCTTCACATTCTCGGCGACCCACTC-CTCC ToLCV TTATGGGTCTCAAAGGCCGCGCAGCGGCATCCTTCACATTCTCGGCGACCCACTC-CTCG AYVV TGATGGGTCTCCATGGCCGCGCAGCGGCACCACTCACATTTTCAGAAACCCACTC-TTCA ToLCLV TTTTGGGCCTCCAAGGCCGCGCAGCGGCATCCCTTACATTCTCGGACACCCACTC-TTCA [ 2161 2220] RANDOM GCTTATGAAGTCGCACTAAGAACACGCTCGGGGCCTCCCCACGCGAAGCGTCTAGGTCAA CLCuMV-[62] AGTTCTTCTG--GAACTTGATCGAAAGAAGAAGGAGAAAAAGGAGAAATATAGGGAGCCG CLCuMV-[26] AGTTCTTCTG--GAACTTGATCGAAAGAAGAAGGAGAAAAAGGAGAAATATAGGGAGCCG CLCuMV-Fai2 AGTTCTTCTG--GAACTTGATCGAAAGAAGAAGGAGAAAAAGGAGAAATATAGGGAGCCG CLCuMV-Fai1 AGTTCTTCTG--GAACTTGATCGAAAGAAGAAGGAGAAAAAGGAGAAATATAGGGAGCCG CLCuMV-Mul AGTTCTTCTG--GAACTTGATCGAAAGAAGAAGAAGAAAAAGGAGAAATATAGGGAGCCG CLCuMV-Ok AGTTCTTCTG--GAACTTGATCAAAAGAAGAACGAGAAAAAGGAGAAATATAGGGAGCCG OYVMV-201 AGTTCTTCTG--GAACTTGATCGAAAGAAGAAGAGGAAAAAGGAGAAACATAAGGAGCTG OYVMFV-[Ind] AGTTCTTCTG--GAACTTGATCAAAAGAAGAAGATAAAAATGGACAAACATAAACCTCCT OYVMFV-[301] AGTTCTTCTG--GAACTTGATCAAAAGAAGAAGAAGAAAAAGGAGATACATAAACCTCCA CLCuLV-[802a] AGTTCTTCAG--GAACTTGATTAAAAGAAGAAGATAAAAAAGGAGAAACATAAACCTCCA CLCuLV-[804a] AGTTCTTCAG--GAACTTGATTAAAAGAAGAAGATAAAAAAGGAGAAACATAAACCTCCA ICMV AGTTCTTCTG--GAACTCGGTCAAACGAAGAGAGAGGGAAAGGGTTCTCATATGGAGGTG ToLCMV AGTTCATCTG--GAACTTGATCAAAGGAAGAAGAAGAAAAAGGAGAAGCATAAACCTCCA PaLCV AGTTCTTCAG--GAACTTGATTAAAAGAAGAAGATAAAAAAGGAGAAACATAAACCTCTA ToLCKV AGTTCTTCTG--GAACCTGATCAAAGGAAGAAGAAGAAAAAGGAGAAACATAAACCTCCA ToLCBDV AGTTCCTCCG--GAACTTGATCAAAAGAAGATGAATTAAAAGGAGAAACATAAACCTCCA CLCuFV-Fai AGTTCTTCTG--GAACTTGATCGAAAGAAGAAGAGGAAAAAGGAGAAACATAAGGAGCTG CLCuFV-[72b] AGTTCATCTG--GAACTTGATCGAAAGAAGAAGAGGAAAAAGGAGAAACATAAGGAGCTG CLCuFV-[806b] AGTTCTTCTG--GAACTTGATCGAAAGAAGAAGAGGAAAAAGGAGAAACATAAGGAGCTG ToLCBV AGTTCCTCTG--GAACTGTATCAAATGAAGAACAAAGAAATGGAGAAACATAAACCTCCG ToLCBV-[Ban4] AGTTCTTCTG--GAACTGTATCAAACGAAGAAGAATGAAAAGGAGAAACATAAGGAGCTG ToLCNdV-Mld AGTTCTGGAG--GAACTCGGTCGAAGGATGAAATTGAAAATGGAGAAACGTAAACCTCAG ToLCNdV-[Luf] AGTTGAGGAG--GAACTCTGTCGAAGGATGAAATTGAAAATGGAGACGCATAAACCTCAG ToLCNdV-Svr AGGTCTGCCG--GAACTCTGTCGAAGGATGAAATTGAAAATGGAGAAACATAAACCTCGG ToLCNdV-[Lu] AGTTCTGGCG--GAACTCTGTCGAAGGAAGAAATTGAAAATGGAGAAACATAAACCTCAG SLCCV AGTTGTTGCG--GAACTCTGTCGAATGATGAAACTGAAAAAGGAGAAACATACACCTCAG TYLCTHV-[1] AGTTCTTCGG--GAACTTGATTGAAAGAAGAAGAAGAAAAGGGAGAAATATATTCCTCTA TYLCTHV-[2] AGTTCTTCGG--GAACTTGATTGAAAGAAGAAGAAGAAAAGGGAGAAATATATTCCTCTA TbLCCNV AGTTCTTCGG--GAACTTGGTCAAATGAAGAAGAAGAAAAAGGAGAAATATATTCCACTA ToLCTWV AGTTCTACTG--GAACTTGATCAAATGAAGAAGAATTAAAAGGAGAAATATAAACCTCTA PepLCV AGTTCCTCTG--GA-CTTGGTCAAATGA-GACCAA--AAAGGGGGAAATGTACATTTCTA TbLCJV AGTTCTTCAG--GAACTTGATCAAATGAAGAACTAGAAAAAGGACAAACAAAAACCTCCA ToLCV-D1 AGTACTTCTG--GAACTCGATCAAAAGAAGAAGATGAAAAAGGAGAAACATAAACCTCCA ToLCV-A1 AGTACTTCTG--GAACTCGATCAAAAGAAGAAGATGAAAAAGGAGAAACATAAACCTCCA ToLCV AGTTCTTCTG--GAACTCGATCAAAAGAAGAAGATAAAAAAGGAGAAACATAAACCTCCA AYVV AGTTCTTCCG--GGACTTGATCAAATGAAGAAGATAAAAAAGGACAAACAAAAACCTCTA ToLCLV AGTTCTTCTG--GAACTTGATCAAAAGAAGAAGAAAGAAAAGGACAAACAAAAACCTCTA [ 2221 2280] RANDOM AAGACAGTCGAACGAACCC-TAGAAGTTAGCGAATGT-TTAGAAATGAATTTGACAACAC CLCuMV-[62] GTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAAT CLCuMV-[26] GTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAAT CLCuMV-Fai2 GTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAAT CLCuMV-Fai1 GTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAAT CLCuMV-Mul GTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAAT CLCuMV-Ok GTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAAT OYVMV-201 GTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAAT OYVMFV-[Ind] GAGGAGGAGTAAAAATCCTATCTAAATTTGAATTTAAATTATGATATTGTAAGACATAAT OYVMFV-[301] TTGGAGGTGTAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAAAACATAAT CLCuLV-[802a] ACGGAGGAGTGAAAATCCTATCTAAATTACTATTTAAATTATGATATTGAAAAATAAATT CLCuLV-[804a] ACGGAGGAGTGAAAATCCTATCTAAATTACTATTTAAATTATGATATTGAAAAATAAATT ICMV GTGGTTTTGTAAAAATCCGATCCAGGTTTGAACTGATGTGATGGAAGTCCCTAAGATAAT ToLCMV TTGGAGGTGTAAAAATCCTATCTAAATTACATTTTAAATTATGATATTGAAAAATAAAAT PaLCV CAGGAGGTGTAAAAATCCTATCTAAATTACATTTTAAATTATGATATTGAAAAATAAAAT ToLCKV TTGGAGGTGTAAAAATCCTATCTAAATTAGAATTTAAATTGTGAAATTGTAAAACATAAT ToLCBDV CCGGAGGTGTAAAAATCCTATCTAAATTAGCATTTAAATTATGAAACTGTAATACAAAAT CLCuFV-Fai GTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGCAGTACAAAAT CLCuFV-[72b] GTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGCAGTACAAAAT CLCuFV-[806b] GTGGCTCCTGAAAGATTCTGTCTAGATTTGCATTTAAATTATGAAATTGCAGCACAAAAT ToLCBV CCGAAGGCGTAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAATACAAAAT ToLCBV-[Ban4] GTGGCTCCTGAAAGTATCTATCTAAATTTGAATTTAAATTATGAAATTGAAGTAGAAAGT ToLCNdV-Mld AACGAGGTTGGAAAATGTGATCCAAATTGCTAATTAGATTATGAAACTGCAGAACATAAT ToLCNdV-[Luf] ACGGAGGTTGAAAAATGCGATCTAAATTGCTAATTAAATTATGAAACTGCAGAACATAAT ToLCNdV-Svr AAGGAGGTTGAAAAATACGATCTAAATTGGTATTTAAATTGTGAAACTGCAGAACGTAAT ToLCNdV-[Lu] AACGAGGTTGAAAAATGCGATCTAAATTTGTAATTAAATTGTGAAACTGCAGAACATAAT SLCCV CACGAGGTGGAAAAATACGATCTAAATTTGAATTCATGTTATGAAATTGCAAAACGTAAT TYLCTHV-[1] TTGGAGGAGTAAAAATCCTATCTAAATTAGAATTTAAATTGTGAAATTGTAAAACAAAAT TYLCTHV-[2] TTGGAGGAGTAAAAATCCTATCTAAATTAGAATTTAAATTGTGAAATTGTAAAACAAAAT TbLCCNV TTGGAGGAGTAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACAAAAT ToLCTWV ATGGAGGTGTAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACAAAAT PepLCV TTCGGAGGCTAAAAATCTTATCTAAATTACTATTTAAATTATGGAATTGTAAAATATAAT TbLCJV ATGGAGGAGCAAAAATCCTATCTAAATTTGAATTTAAATTATGAAATTGTAAAACAAAAT ToLCV-D1 ACAGAGGTGTAAAAATCCTATCTAAATTACTATTTAAATTATGGAATTGTAAAACATAAT ToLCV-A1 ACGGAGGTGTAAAAATCCTATCTAAATTACTATTTAAATTATGAAATTGTAAAACATAAT ToLCV ACGGAGGTGTAAAAATCCTATCTAAATTACTATTTAAATTATGAAATTGTAAAACATAAT AYVV AAGGAGGTGCAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAAAACATAAT ToLCLV AAGGAGGTGCAAAAATCCTATCTAAATTAGAATTTAAATTATGAAATTGTAAAACATAAT [ 2281 2340] RANDOM TCATGGGGATCTTCTAGCCAAGTGCGTTTCGTGTTTTTCATGTGCTTGGCTTATGAAGTC CLCuMV-[62] CTTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCTGATTTACTTCCTGCGTTAAGTG CLCuMV-[26] CTTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCTGATTTACTTCCTGCGTTAAGTG CLCuMV-Fai2 CTTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCTGACTTACTTCCTGCGTTAAGTG CLCuMV-Fai1 CTTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCTGACTTACTTCCTGCGTTAAGTG CLCuMV-Mul CTTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCTGACTTACTGCCTGCGTTAAGTG CLCuMV-Ok CTTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCTGACTTACTGCCTGCGTTAAGTG OYVMV-201 CTTTAGGAGCTAGCTCCTTGATGACTCTAAGAGCCTCTGACTTACTTCCCGCGTTAAGTG OYVMFV-[Ind] CTTTGGGGGCTAATTCTTTAAGAACTCTAAGAGCCTCTGCCTTACTTCCTGTGTTAAGTG OYVMFV-[301] CCTTTGGAGCTAACTCCTTAATTACTCTAAGAGCCTCTGACTTACTACCTGCGTTAAGCG CLCuLV-[802a] TTTCTGGGAGTTTTTCCCTTATTATAGCCATAGCTGCTTCTTTAGAACCTGCATTTAGGG CLCuLV-[804a] TTTCTGGGAGTTTTTCCCTTATTATAGCCATAGCTGCTTCTTTAGAACCTGCATTTAGGG ICMV CCCTAGGTGCTAATTCTCTAAGGATCTTAAGAGCCTCTGATTTACTGCCGCTGTTAAGTG ToLCMV CTTTAGGGAGTTTTTCCCTAATTATTGCTAAAGCTGCTTCAGCTGAACCTGCATTTAAGG PaLCV CTTTAGGGAGTTTTTCCCTATTTATTGCTAAAGCTGCGTCAGCTGAACCTGCATTTAGGG ToLCKV CTTTGGGAGCCTTCTCCCTTAATATATTGAGGGCCTCAATTTTTGACCCTGCGTTGATTG ToLCBDV CTTTGGGAGCCTTCTCCCTTAAAATATTGAGGGCCGCAGCCTTGGACCCTGAATTGATTG CLCuFV-Fai CCTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCCGACTTACTTCCCGCGTTAAGTG CLCuFV-[72b] CCTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCCGACTTACTTCCCGCGTTAAGTG CLCuFV-[806b] CCTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCCGACTTACTTCCCGCGTTAAGTG ToLCBV CTTTGGGAGCTTTCTCCCTTAAAATATCGAGGGCCGCAGCTTTGGACCCTGAATTGATTG ToLCBV-[Ban4] CTCTGGGAGCTTTCTCCTTCAGTATATTGAGGGCCTCAGCTTTGGACCCTGAATTGATTG ToLCNdV-Mld CCGTTGGGGCTAATTCCTTAAATACTGACAATGCATCTTCCTTATTCCCCGTGTTAATCG ToLCNdV-[Luf] CTTTTGGGGCTAATTCCTTTAACACTTTCAATGCATCTTCTTTATTCCCCGTGTTAATCG ToLCNdV-Svr CTTTTGGGGCTAATTCCTTTAATACTCTCAAAGCATCGTCTTTATTTCCCGTGTTAATCG ToLCNdV-[Lu] CCTTTGGTGCAAGTTCTTTTAATACTTTCATCGCATCTTCTTTATTTCCTGTGTTAATCG SLCCV CTTTGGGTGCTAATTCTTTCAACACTTTCAATGCATCTTCCTTGGTTCCTGTATTTATTG TYLCTHV-[1] CTTTAGGGGCCTTTTCCCTCAGTATATTGAGGGCCGAAGCCTTGGACCCTGAATTGATTG TYLCTHV-[2] CTTTAGGGGCCTTTTCCCTCAGTATATTGAGGGCCGAAGCCTTGGACCCTGAATTGATTG TbLCCNV CTTTAGGAGCCTTTTCCCTCAGTATATTGAGGGCCGAAGCTTTGGACCCTGAATTGATTG ToLCTWV CTTTGGGAGCTTTCTCCCTTAATATATTGAGGGCCTCAGCTTTGGACCCTGAATTGATTG PepLCV CTTTTGGGGCCTCTTCTTTCAAAATTGCGAGTGCCGAAGCTTTGGTTCCTGAATTGAGTG TbLCJV CTTTGGGAGCTTTCTCCCTTAATATATTGAGTGCCGATGACTTTGATCCTGAGTTGATTG ToLCV-D1 CCTTAGGGGCTAATTCCCTAAGGACGTTAAGAGCCTCTGACTTACTTCCAGTGTTAAGCG ToLCV-A1 CCTTAGGGGCTAATTCCCTAAGGACGTTAAGAGCCTCTGACTTACTTCCAGTGTTAAGCG ToLCV CCTTAGGGGCTAATTCCCTAAGGACGTTAAGAGCCTCTGACTTACTTCCAGTGTTAAGCG AYVV CTTTAGGAGCTAACTCCTTAATTACATTAAGAGCCTCTGACTTACTGCCGCTGTTAAGTG ToLCLV CTTTGGGGGCTAATTCTTTAATTACATTAAGAGCCTCTGACTTACTTCCGCTGTTAAGTG [ 2341 2400] RANDOM GCACTAAGAACACGCTCGGGGCCTCCCCACGCGAAGCGTCTAGGTCAAAAGACAGTCGAA CLCuMV-[62] CTTCGGCGTAAGC-GTCGTTGGCTGTCT--GCTGTCCTCCT---CTTGCTGATCTTCCAT CLCuMV-[26] CTTCGGCGTAAGC-GTCGTTGGCTGTCT--GCTGTCCTCCT---CTTGCTGATCTTCCAT CLCuMV-Fai2 CTGCGGCGTAAGC-GTCGTTGGCTGTCT--GCTGTCCTCCT---CTTGCTGATCTTCCAT CLCuMV-Fai1 CTGCGGCGTAAAC-GTCGTTGGCTGTCT--GCTGTCCTCCT---CTTGCTGATCTTCCAT CLCuMV-Mul CTGCGGCGTAAGC-GTCGTTGGCTGTCT--GTTGTCCTCCT---CTTGCTGATCTTCCAT CLCuMV-Ok CTGCGGCGTAAGC-GTCGTTTGCTGTCT--GTTGTCCTCCT---CTTGCTGATCTTCCAT OYVMV-201 CTGCGGCGTAAGC-GTCGTTGGCTGTTT--GTTGCCCTCCT---CTTGCTGATCTTCCGT OYVMFV-[Ind] CTGCCGCGTAAGC-GTCATTGGCTGATT--GTTGTCCTCCC---CTTGCAGATCTGCCGT OYVMFV-[301] CTGCGGCGTAAGC-GTCATTGGCTGATT--GTTGTCCTCCT---CGTGCAGATCGTCCAT CLCuLV-[802a] CTTCTGCAGCAGC-ATCATTAGCTGTCT--GTTGACCTCCT---CTTGCAGATCTTCCAT CLCuLV-[804a] CTTCTGCAGCAGC-ATCATTAGCTGTCT--GTTGACCTCCT---CTTGCAGATCTTCCAT ICMV CCGCGGCGTAAGC-GTCGTTTGCAGATT--GTTGACCCCCT---CTGGCTGATCGTCCAT ToLCMV CCTCTGCGGCAGC-ATCATTAGCTGTCT--GTTGACCTCCT---CGTGCAGATCTTCCAT PaLCV CCTCTGCTGCTGC-ATCATTAGCTGTCT--GTTGACCTCCT---CGACCATATCTTCCAT ToLCKV CCTCGGCATATGC-GTCGTTGGCAGATT--GGCAACCTCCT---CTAGCTGATCTTCCAT ToLCBDV CCTCGGCATATGC-GTCGTTGGCAGATT--GGCAACCTCCT---CTAGCTGATCTGCCAT CLCuFV-Fai CTGCGGCGTAAGC-GTCATTGGCTGTCT--GTTGCCCTCCT---CTTGCTGACCTTCCGT CLCuFV-[72b] CTGCGGCGTAAGC-GTCATTGGCTGTCT--GTTGCCCTCCT---CTTGCTGACCTTCCGT CLCuFV-[806b] CTGCGGCGTAAGC-GTCATTGGCTGTCT--GTTGCCCTCCT---CTTGCTGACCTTCCGT ToLCBV CCTCGGCATATGC-GTCGTTGGCAGATT--GCTGACCTCCT---CTAGCTGATCTGCCAT ToLCBV-[Ban4] CCTCGGCATATGC-GTCGTTGGCAGATT--GGCAACCTCCT---CTAGCTGATCGTCCAT ToLCNdV-Mld CCTCAGAATATGC-ATCGGTGGCTGTCT--GCTGACCACCA---CGAGCAGATCGTCCAT ToLCNdV-[Luf] CCTTAGCATATGC-GTCGTTGGCCGTCT--GCTGACCACCA---CGAGCAGATCGTCCAT ToLCNdV-Svr CCTGGGCATATGC-ATCGTTCGCCGTTT--GTTGACCACCA---CGGGCAGATCGTCCAT ToLCNdV-[Lu] CCTGAGCATATGC-ATCGTTTGCTGTTT--GCTGACCACCA---CGAGCAGATCGTCCAT SLCCV CCCTTGCGTACGCCGTCGTTTGCTGTTT--GTTGACCTCCA---CGAGCAGATCGACCAT TYLCTHV-[1] CCTCGGCATATGC-GTCGTTGGCAGATT--GGCAACCTCCT---CTAGCCGATCTTCCAT TYLCTHV-[2] CCTCGGCATATGC-GTCGTTGGCAGATT--GGCAACCTCCT---CTAGCCGATCTTCCAT TbLCCNV CCTCGGCATATGC-GTCGTTGGCAGATT--GGCAACCTCCT---CTAGCCGATCTTCCAT ToLCTWV CCTCGGCATATGC-GTCGTTGGCAGATT--GGCAACCTCCT---CTAGCTGATCTTCCAT PepLCV CCTCGGCATATGC-GTCGTTGGCAGATT--GGCAACCCCCT---CGAGCCGATCTTCCAT TbLCJV CCTCGGCATATGC-GTCGTTGGCAGATT--GGCAACCTCCC---CTAGCTGATCTTCCAT ToLCV-D1 CCTGGGCGTAAGC-GTCATTGGCTGATT--GTTGTCCCCCT---CTTGCAGATCGTCCAT ToLCV-A1 CCTGGGCGTAAGC-GTCATTGGCTGATT--GTTGTCCCCCT---CTTGCAGATCGTCCAT ToLCV CCTGGGCGTAAGC-GTCATTGGCTGATT--GTTGTCCCCCT---CTTGCAGATCGTCCAT AYVV CCTGGGCGTAAGC-GTCATTGGCTGTCT--GTTGTCCTCCT---CTTGCAGATCGTCCAT ToLCLV CTTTGGCGTAAGC-GTCATTGGCTGTCT--GTTGTCCTCCC---CTTGCAGATCTTCCAT [ 2401 2460] RANDOM CGAACCCTAGAAGTTAGCGAATGTTTAGAAATGAATTTGACAACACTCATGGGGATCCAA CLCuMV-[62] CGA--TCTGAAACTCTCC--CCACTCGAGAGTGTCCCCGTCCTTGTCGATGTAGGCCTTG CLCuMV-[26] CGA--TCTGAAACTCTCC--CCACTCGAGAGTGTCCCCGTCCTTGTCGATGTAGGCCTTG CLCuMV-Fai2 CGA--TCTGAAACTCTCC--CCACTCGAGAGTGTCCCCGTCCTTGTCGATGTAGGCCTTG CLCuMV-Fai1 CGA--TCTGAAACTCTCC--CCACTCGAGAGTGTCCCCGTCCTTGTCGATGTAGGCCTTG CLCuMV-Mul CGA--TCTGAAACTCTCC--CCACTCGAGAGTGTCCCCGTCCTTGTCGATGTAGGCCTTG CLCuMV-Ok CGA--TCTGAAACTCTCC--CCATTCGAGAGTGTCCCCGTCCTTGTCGATGTAGGCCTTG OYVMV-201 CGA--TCTGAAATTCCCC--CCAGTCGAGAATGTCCCCGTCCTTGGCGATGTAGGACTTG OYVMFV-[Ind] CGA--TCTGGAATTCCCC--CCATTCAAGGGTATCTCCGTCCTTGTCGATATAGGACTTG OYVMFV-[301] CGA--TCTGAAACCCTCC--CCAGTCGATGGTGTCTCCGTCCTTCTCCAGATAAGACTTG CLCuLV-[802a] CGA--TCTGAAATGTGCC--CCAGTCGATGTAATCTCCGTCCTTCTCGATGTAGGACTTA CLCuLV-[804a] CGA--TCTGAAATGTGCC--CCAGTCGATGTAATCTCCGTCCTTCTCGATGTAGGACTTA ICMV CGA--TCTGAAATGTTCC--CCATCTCCAAGTATCACCGTCCTTGTCGATGTAGGACTTG ToLCMV CGA--TCTGAAACTCACC--CCAGTCGATGTAATCACTGTCCTTCTCGATGTAGGACTTG PaLCV CGA--TCTGAAACTGACC--CCAGTCGATGTAATCACTGTCCTCCTCGATGTAGGACTTG ToLCKV CGA--CTTGGAAAACTCC--ATGATCAAGGATGTCTCCGTCTTTCTCCATGTAGGTTTTG ToLCBDV CGA--TCTGGAAAACTCC--AAAATCAATGAAGTCTCCGTCTTTCTCCACATAGGCTTTG CLCuFV-Fai CGA--TCTGAAATTGCCC--CCAGTCGAGAATGTCCCCGTCCTTCTCGATGTAGGATTTG CLCuFV-[72b] CGA--TCTGAAATTGCCC--CCAGTCGAGAATGTCCCCGTCCTTCTCGATGTAGGATTTG CLCuFV-[806b] CGA--TCTGAAATTGCCC--CCAGTCGAGAATGTCCCCGTCCTTCTCGATGTAGGATTTG ToLCBV CGA--TTTGGAAAACTCC--AAAATCAATGAAGTCTCCGTCTTTTTCCACATAGGCCTTG ToLCBV-[Ban4] CGA--CTTGGAAAACTCC--ATGATCAATGACGTCTCCGTCTTTTTCCATATAGGATTTG ToLCNdV-Mld CGA--TCTGGAAAACACC--CCATTCTAGAACGTCTCCGTCTTTGTCGATGTATGCTTTG ToLCNdV-[Luf] CGA--TCTGGAAAACACC--CCATTCTAGAACGTCTCCGTCTTTGTCGATGTATGCTTTG ToLCNdV-Svr CGA--TCTGGAAAACACC--CCATTCTAGAACGTCTCCATCTTTGGCGATGTAGTTTTTG ToLCNdV-[Lu] CGA--TCTGGAAAACACC--CCATTCTAGAACGTCTCCGTCTTTGTCGATGTATGCTTTG SLCCV CGA--TCTGGAAGACACC--CCATTCTAACACGTTCCCGTCTTTGTCGATGTATTGTTTG TYLCTHV-[1] CGA--TTTGGAAAATTCC--ATGATCAAGCACGTCTCCGTCTTTTTCCATGTATGCTTTA TYLCTHV-[2] CGA--TTTGGAAAATTCC--ATGATCAAGCACGTCTCCGTCTTTTTCCATGTATGCTTTA TbLCCNV CGA--TCTGGAAAACTCC--ATGATCAAGCACGTCTCCGTCTTTTTCCATGTAGGATTTG ToLCTWV CGA--CCTGGAAAATTCC--ATGATCAAGCACGTCTCCGTCTTTCTCCATATAGGTTTTG PepLCV CGA--TCTGGAAAACCCC--ATGATCAAGAACGTCTCCGTTTTTTGCGATATATTCTTTG TbLCJV CGA--CTTGGAAAACTCC--AAAATCAAGGATGTCTCCGTCTTTCTCCATGTAGGACTTG ToLCV-D1 CGA--TCTGAAACTCTCC--CCATTCGAGGGTGTCTCCGTCCTTCTCCAGATAGGACTTG ToLCV-A1 CGA--TCTGAAACTCTCC--CCATTCGAGGGTGTCTCCGTCCTTCTCCAGATAGGACTTG ToLCV CGA--TCTGAAACTCTCC--CCATTCGAGGGTGTCTCCGTCCTTCTCCAGATAGGACTTG AYVV CGA--TCTGAAACTCACC--CCATTCGAGGGTGTCTCCGTCCTTGTCGATATAGGACTTG ToLCLV CGA--TCTGAAACTCGCC--CCAGTCGAGGGTGTCTCCGTCCTTCTCCAGATAGGACTTA [ 2461 2520] RANDOM TCCGTCAGAAGTTTATCCGAACCGCCGGACACGCA-ATGGAAGTCCACATTAGCCCGAGC CLCuMV-[62] AC-ATCTGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGATCTGG-T CLCuMV-[26] AC-ATCTGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGATCTGG-T CLCuMV-Fai2 AC-ATCTGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGATCTGG-T CLCuMV-Fai1 AC-ATCTGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGATCTGG-T CLCuMV-Mul AC-ATCTGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T CLCuMV-Ok AC-ATCTGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T OYVMV-201 AC-GTCGGAGCTGGATTTAACTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T OYVMFV-[Ind] AC-GTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAAT--GTGCTGACCTGT-T OYVMFV-[301] AC-GTCGGAACTTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGATCTGG-T CLCuLV-[802a] AC-ATCAGAGCTGGACTTAGCTCCCTGGAAGTTTGGATGGAATT--GGGTGGAGGTAT-G CLCuLV-[804a] AC-ATCAGAGCTGGACTTAGCTCCCTGGAAGTTTGGATGGAATT--GGGTGGAGGTAT-G ICMV AC-GTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAAT--GTGCTGACCTGG-T ToLCMV AC-ATCGGAGCTGAGCTTAGCTCCCTGGAAGTTTGGATGGAATT--GGGTGGAGTTAT-T PaLCV AC-ATCAGAGCTGGACTTAGCTCCCTGGAAGTTTGGGTTGAATT--GGGTGGAGTTAT-T ToLCKV AC-ATCGCTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T ToLCBDV AC-ATCTGACGCGCTCTTAGCTCCCTGAATGTTCGGATGGAAAT--TTGCTGACCTGG-T CLCuFV-Fai AC-GTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAAT--GTGCTGACCTGC-T CLCuFV-[72b] AC-GTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAAT--GTGCTGACCTGC-T CLCuFV-[806b] AC-GTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAAT--GTGCTGACCTGC-T ToLCBV AC-ATCTGAACTGCTCTTAGCTTTCTGAATGTTTGGATGGAAAT--GTGTTGATCTGG-T ToLCBV-[Ban4] AC-ATCACTTGCGCTTTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T ToLCNdV-Mld AC-ATCTGACGCTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACC-GACT ToLCNdV-[Luf] AC-ATCTGACGCTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACC-GACT ToLCNdV-Svr AC-GTCCGACGCTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACC-GACT ToLCNdV-[Lu] CA-GTCCGATGCTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACC-GACT SLCCV AC-GTCCGATGCCGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCCGACT TYLCTHV-[1] AC-ATCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T TYLCTHV-[2] AC-ATCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T TbLCCNV AC-ATCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGT-G ToLCTWV AC-ATCTGTTGAGCTCTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T PepLCV AC-ATCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T TbLCJV AC-ATCTGACGAGCTTTTAGCCGCCTGAATGTTCGGATGGAAAT--GTGCTGACCTAC-T ToLCV-D1 AC-GTCTGAGGAGCCCTTAGCTCCCTGAATGGTCGGATGGAAAT--GTGCTGACCTGG-T ToLCV-A1 AC-GTCTGACGAGCTCTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T ToLCV AC-GTCTGACGAGCTCTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T AYVV AC-GTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-A ToLCLV AC-GTCTGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAAT--GTGCTGACCTGG-T [ 2521 2580] RANDOM AGAAAGCATTCTGTATAGGTATGTGAGTAGTGAAGAGTCTGGATCACCGCCAAGGTTGTT CLCuMV-[62] TGGGGATACCAGGTCGAAGAAT-CTGTTATTCGTGCAGACGAATTTGCCCTCGAACTGGA CLCuMV-[26] TGGGGATACCAGGTCGAAGAAT-CTGTTATTCGTGCAGACGAATTTGCCCTCGAACTGGA CLCuMV-Fai2 TGGGGATACCAGGTCGAAGAAT-CTGTTATTCGTGCATACGAATTTACCCTCGAACTGGA CLCuMV-Fai1 TGGGGATGCCAGGTCGAAGAAT-CTGTTATTCGTGCAGACGAATTTGCCCTCGAACTGGA CLCuMV-Mul TGGGGATACCAGGTCGAAGAAT-CTGTTATTCGTGCATTGGTACTTCCCCTCGAACTGGA CLCuMV-Ok TGGGGATACCAGGTCGAAGAAT-CTGTTATTCGTGCATTGGTACTTGCCCTCGAACTGGA OYVMV-201 TGGGGATACGAGGTCGAAGAAT-CTGTTATTTTTGCACTTGTATTTCCCTTCGAACTGGA OYVMFV-[Ind] TGTGGCGACCAAGTCGAAGAAT-CTCTGATTCTGGCACTTGTATTTTCCTTCGAACTGGA OYVMFV-[301] TGGGGAGACCAGGTCGAAGAAT-CGTTGATTTTGGCACTTGTATTTTCCCTCGAACTGGA CLCuLV-[802a] AGGGTGAGTGACATCGAAATGT-CTGGGGTTTCTGAACTTGGCTTTACCTTTGAATTGGA CLCuLV-[804a] AGGGTGAGTGACATCGAAATGT-CTGGGGTTTCTGAACTTGGCTTTACCTTTGAATTGGA ICMV TGGTGATACCAGGTCGAAGAAT-CGCTGATTCTGGCATTTGTATTTGCCTTCGAACTGGA ToLCMV AGGGTGAGTGACATCGAAATGT-CTGGGGTTTCGGAACTTGGATTTACCCTTGAATTGGA PaLCV AGGGTGAGTGACATCGAAATGT-CTGGTGTTTCTGAACTTGGATTTACCTTTGAACTGGA ToLCKV TGGGGAGGTAAGGTCGAAGAAT-CTATTGTTCTTGCACTGGAATTTTCCTTCGAACTGGA ToLCBDV TGTGGAAACCAGGTCGAAGAAT-CTGTTGTTCTGACACTTGAATTTTCCTTCGAACTGGA CLCuFV-Fai TGGGGAGACCAAGTCGAAGAAT-CGCATATTCTGGCACTTGAATTTCCCTTCGAACTGGA CLCuFV-[72b] TGGGGAGACCAAGTCGAAGAAT-CGCATATTCTGGCACTTGAGTTTCCCTTCGAACTGGA CLCuFV-[806b] TGGGGAGACCAAGTCGAAGAAT-CGCATATTCTGGCACTTGAATTTCCCTTCGAACTGGA ToLCBV TGGGGAAACCAGGTCGAAGAAT-CTGTTATTTGTGCATTGGAATTTTCCTTCGAACTGGA ToLCBV-[Ban4] TGGGGATGTGAGGTCGAAGAAT-CTATTGTTTTTGCACTGGAACTTTCCTTCGAACTGGA ToLCNdV-Mld TGGGGAAACCAAGTCGAAGAAT-CTGTTATTTTTGCACTGGAATTTCCCTTCGAATTGGA ToLCNdV-[Luf] TGGGGAAACCAAGTCGAAGAAT-CTGTTATTCTTGCACTGGAATTTCCCTTCGAATTGGA ToLCNdV-Svr TGGGGAAACCAAGTCGAAGAAT-CTGTTATTTTTGCACTGGAATTTCCCTTCGAATTGGA ToLCNdV-[Lu] TGGGACAACCAAGTCGAAGAAT-CTGTTATTTTTGCATTGGAATTTTCCTTCGAATTGGA SLCCV TGGGGAAACCAAGTCGAAGAAT-CTGATATTCTTGCACTGGAACTTTCCTTCGAACTGAA TYLCTHV-[1] TGGGGATGTGAGATCGAAGAAT-CGGTTATTTTGGCATTTGAATTTTCCTTCGAATTGGA TYLCTHV-[2] TGGGGATGTGAGATCGAAGAAT-CGGTTATTTTGGCATTTGAATTTTCCTTCGAATTGGA TbLCCNV TGGGGATGTGAGATCGAAGAAT-CTTTGATTCTTACACTGGAACTTTCCTTCGAATTGGA ToLCTWV TGGGGATGTGAGGTCGAAGAAT-CTGTTATTTTTACATTGGAATTTTCCTTCGAATTGGA PepLCV TGGGGATGTGAGGTCGAAGAAT-CGTGGATTTTTGCATTGGAA