Blankenship RE, Tiede DM, Barber J, Brudvig GW, Fleming G, Ghirardi M, Gunner MR, Junge W, Kramer DM, Melis A, Moore TA, Moser CC, Nocera DG, Nozik AJ, Ort DR, Parson WW, Prince RC and Sayre RT (2011) What is the solar energy conversion efficiency of natural photosynthesis compared to photovoltaic cells? (Science, in press).
Sayre RT et al., (2011) Crop biofortification for Africa, the BioCassava Plus Program. (Annual Review of Plant Biology, in press)
Rajamani S, Teplitski M, Kumar A, Krediet C, Sayre RT and Bauer WD (2011) AHL lactonase (AiiA) inactivation of quorum sensing agonists produced by Chlamydomonas reinhardtii and characterization of aiiA transgenic algae. (J. Phycology, in press).
He Z, Siripornadulsil S Sayre RT, Traina SJ and Weavers LK (2011) Removal of mercury from sediment by ultrasound combined with biomass (transgenic Chlamydomonas reinhardtii). Chemosorb (in press).
Perrine Z and Sayre RT (2011) Modulating the Redox Potential of the Stable Electron Acceptor, QB, in Mutagenized Photosystem II Reaction Centers. Biochemistry 50:1454-1464.
Rajamani S and Sayre RT (2011) A sensitive fluorescence reporter for monitoring quorum sensing regulated protease production in Vibrio harveyi. Journal of Microbiological Methods 84 (2011) 189-193.
Sayre RT (2010), Biofortification of cassava for Africa: The BioCassava Plus program; Chapter 12 in; 'Access not Excess': editor, C. Pasternak; Smith-Gordon Press.
Rajamani S and Sayre RT (2010) FRET-based biosensors for the detection and quantification of AI-2 class of quorum sensing compounds. In, Quorum Sensing: Methods and Protocols, Kendra Rumbaugh, ed. Humana Press.
Sayre RT (2010) Microalgal biofuels; carbon capture and sequestration. Bioscience 60:722-727.
Narayanan NN, Ihemere U, Chiu WT, Moon H, Singh S, Oda S, Siritunga D, Rajamani S and Sayre RT (2010) Functional Characterization of FEA1, a Novel Iron Transporter from Chlamydomonas reinhardtii and its Role in Iron Homeostasis. Plant Cell (submitted).
Rajamani S, Teplitski M, Kumar A, Krediet C, Sayre RT and Bauer WD (2010) AHL lactonase (AiiA) inactivation of quorum sensing agonists produced by Chlamydomonas reinhardtii and characterization of aiiA transgenic algae. Environ. Microbiol. Environ. Microbiol. Rep. (J. Phycology, in press).
Rajamani S, Torres M, Falcao V, Ewalt J, Colepicolo P Sayre RT (2010) Non-invasive detection of heavy metals in microalgae. J. Phycol. (submitted).
Gallo M and Sayre RT (2009) Removing allergens and toxins from foods. Curr Opin. Biotechnol. 20: 191-196. PubMed
Gokhale Z and Sayre RT (2008) Photosystem II, A Structural Approach. In; The Chlamydomonas Sourcebook, Volume 2; David Stern, editor; pgs 573-602. Elsevier. [link]
Ihemere U, Siritunga D and Sayre RT (2008) Transgenic Cassava. In: Transgenics and Molecular Tailoring in Plants. Chitta R Kole, Ralph Scorza and Timothy Hall, editors. Blackwell Scientific. Request Copy
Torres MA, Barros MP, Campos SCG, Pinto E, Rajamani S, Sayre RT, and Colepicolo P (2008) Biochemical biomarkers in algae and marine pollution. Ecotox. Environ. Safety 71:1-15. PubMed
Rajamani S, Bauer WD, Robinson JB, Teplitski M, Gao M, Sayre RT and Phillips DA (2008) The LasR bacterial quorum sensing receptor recognizes riboflavin and lumichrome as well as N-acyl homoserine lactones. Molec. Plant Microbe Interact. 21:1184-1192. (selected for journal cover page).PubMed
Siritunga D and Sayre RT (2007) Transgenic approaches for cyanogen reduction in cassava. J. Assoc. Off. Anal. Chem. 90:1450-1455. PubMed
Merchant S, et al. (2007) The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science 318: 245-251. PubMed
Makarova V, Kosourov S, Krendeleva T, Semin B, Kukarskikh G, Rubin A, Sayre RT, Ghirardi M, and Seibert M (2007) Photoproduction of hydrogen by sulfur-deprived C. reinhardtii mutants with impaired Photosystem II photochemical activity. Photosyn. Res. 94: 79-89. PubMed
Rajamani S, Zhu G, Pei D and Sayre RT (2007) A LuxP-FRET reporter for direct detection and quantification of AI-2-related bacterial quorum sensing signals. Biochem. 46: 3990-3997. (cited by Faculty of 1000 as a high impact paper) Request Copy
Siripornadulsil S, Dabrowski K, Sayre RT (2006) Microalgal vaccines. In: Transgenic Microalgae as Green Factories. Emilio Fernandes, Aurora Galvan, Rosa Leon, eds. Landes Press. Request Copy
Rajamani S, Siripornadulsil S, Falcao V, Torres M, Colepicolo P, Sayre R. (2006) Phycoremediation of heavy metals using transgenic microalgae. In: Transgenic Microalgae as Green Factories. Emilio Fernandes, Aurora Galvan, Rosa Leon, eds. Landes Press. PubMed
Msikita W, Ihemere U, Siritunga D and Sayre RT (2006) Cassava (Manihot esculenta Cranz) Transformation. In: Agrobacterium Protocols: Methods in Molecular Biology. vol. 344, pgs 13-24. Kan Wang, ed. Humana Press. PubMed
Ihemere, U, Arias-Garzon D, Lawrence S and Sayre RT (2006) Genetic modification of cassava for enhanced starch production. Plant Biotechnology Journal 4: 453-465. PubMed
Xiong L and Sayre RT (2006) Engineering the chloroplast encoded proteins of Chlamydomonas. In: Celebrating the Millennium: Historical Highlights of Photosynthesis Research, Part 3. Guest Editors: Govindjee, John F. Allen & J. Thomas Beatty. Pgs 411-419. Springer Verlag. 2023. PubMed
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(University of Nebraska-Lincoln)
Publications (10 most related to CABS project)
Clemente T, Cahoon EB (2009) Soybean oil: genetic approaches for modification of functionality and total content. Plant Physiol. 151: 1030-1040. PubMed
Chen M, Saucedo-Garcia M, Plasencia J, Gavilanes-Ruiz M, Cahoon EB (2009) Chapter 5: Plant sphingolipids: structure, synthesis and function. In: Lipids in Photosynthesis: Essential and Regulatory Functions, eds. H. Wada and N. Murata, Springer Science, pp. 77-115. Request Copy
Ramamoorthy V, Cahoon EB, Thokala M, Kaur J, Li J, Shah DM (2009) Sphingolipid C9-methyltransferases are important for growth and virulence but not for sensitivity to antifungal plant defensins in Fusarium graminearum. Eukaryotic Cell 8: 217-229. PubMed
Chen M, Markham JE, Dietrich CR, Jaworski JG, Cahoon EB (2008) Sphingolipid long-chain base hydroxylation is important for growth and for the regulation of sphingolipid content and composition in Arabidopsis. Plant Cell 20:1862-1878. PubMed
Dietrich CR, Han G, Chen M, Berg RH, Dunn TM, Cahoon EB (2008) Loss-of-function mutations and inducible RNAi suppression of Arabidopsis LCB2 genes reveal the critical role of sphingolipids in gametophytic and sporophytic cell viability. Plant Journal 54: 284-298 (cover article). PubMed
Cahoon EB, Shockey JM, Dietrich CR, Gidda SK, Mullen RT, Dyer JM (2007) Engineering oilseeds for sustainable production of industrial and nutritional feedstocks: solving bottlenecks in fatty acid flux. Curr. Opin. Plant. Biol. 10: 236-244. PubMed
Cahoon EB, Schmid KM (2008) Chapter 7: Metabolic engineering of the content and fatty acid composition of vegetable oils. In: Bioengineering and Molecular Biology of Plant Pathways, Vol. 1, eds. N. Lewis and H. Bohnert, Elsevier, pp. 161-200. Request Copy
Cahoon EB, Dietrich CR, Meyer K, Damude HG, Dyer JM, Kinney AJ (2006) Conjugated fatty acids accumulate to high levels in phospholipids of metabolically engineered soybean and Arabidopsis seeds. Phytochemistry 67: 1166-1176. PubMed
Schmidt MA, Dietrich CR, Cahoon EB (2004) Biotechnological enhancement of soybean oil for lubricant applications. In Synthetic, Mineral Oil, and Bio-Based Lubricants: Chemistry and Technology (Ed. Rudnick L). CRC Press, Boca Raton, FL, pp 389-397. Request Copy
Cahoon EB, Hall SE, Ripp KG, Ganzke TS, Hitz WD, Coughlan SJ (2003) Metabolic redesign of vitamin E biosynthesis in plants for tocotrienol production and increased antioxidant content. Nature Biotechnology 21: 1082-1087. PubMed
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Dr. David Gang
(Washington State University)
Publications (10 most related to CABS project)
Xie, Z., Kapteyn, J., Gang, D. R. (2008) A systems biology investigation of the MEP/terpenoid and shikimate/phenylpropanoid pathways points to multiple levels of metabolic control in sweet basil glandular trichomes. The Plant Journal, 54:349-361. PubMed
Jiang, H., Timmermann, B. N., Gang, D. R. (2005) Use of LC-ESI-MS/MS to identify diarylheptanoids in turmeric (Curcuma longa L.) rhizome. J. Chromatog. A. 1111: 21-31. doi:10.1016/j.chroma.2006.01.103. PubMed
Jiang, H., Somogyi, A., Jacobsen, N. A., Timmermann, B. N., Gang, D. R. (2006) Analysis of curcuminoids by positive and negative electrospray ionization and tandem mass spectrometry. Rapid Commun. Mass Spectrom. 20(6): 1001-1012. PubMed
Jiang, H., S?lyom, A., Timmermann, B. N., Gang, D. R. (2005) Characterization of gingerol-related compounds in ginger rhizome (Zingiber officinale Rosc.) by high-performance liquid chromatography/electrospray ionization mass spectrometry. Rapid Commun. Mass Spectrom. 19 (20): 2957-2964. PubMed
Jiang, H., Somogyi, A., Timmermann, B. N., Gang, D. R. (2006) Instrument Dependence of ESI Ionization and MS/MS Fragmentation of the Gingerols. Rapid Commun. Mass Spectrom. 20(20): 3089-3100. PubMed
Jiang, H., Timmermann, B. N., Gang, D. R. (2007) Characterization and identification of diarylheptanoids in ginger (Zingiber officinale Rosc.) using high-performance liquid chromatography/electrospray ionization mass spectrometry. Rapid Commun. Mass Spectrom. 21(4), 509 - 518 PubMed
Ma, X.-Q., Tan, C., Zhu, D., Gang, D. R (2005) Huperzine A Content of Huperziaceae Species in China. J. Agric. Food Chem. 53:1393-1398. PubMed
Xie, Z., Ma, X.-Q., and Gang, D. R (2009) Modules of co-regulated metabolites in turmeric (Curcuma longa) rhizome suggest the existence of biosynthetic modules in plant specialized metabolism. J. Exp. Bot., 60, 87-97. PubMed
Ma, X.-Q., Gang, D. R. (2008) In vitro production of huperzine A, a promising drug candidate for Alzheimer's disease. Phytochemistry 69(10):2022-2028. PubMed
Ma, X.-Q., Gang, D. R. (2006) Metabolic profiling of Turmeric (Curcuma longa L.) plants derived from in vitro micropropagation and conventional greenhouse cultivation. J. Agric. Food Chem. 54 (25), 9573 -9583. PubMed
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Dr. Leslie Hicks
(Donald Danforth Plant Science Center)
Selected Publications, 2010-2000
E. Marsh, S. Alvarez, L. M. Hicks, W. B. Barbazuk, W. Qiu, L. Kovacs, D. Schachtman (2010) Temporal Analysis of Changes in Protein Abundance During Powdery Mildew Infection of Leaf Tissues of Cabernet Sauvignon Grapevine (Vitis vinifera L.). Proteomics accepted.
J. Ning, X. Li, L. M. Hicks, L. Xiong (2010) A Raf-like MAPKKK gene DSM1 mediates drought resistance through ROS scavenging in rice. Plant Phys. 152, 876-890. PubMed
B. Wu, B. Zhang, X. Feng, B. Berla, J. R. Rubens, L. M. Hicks, H. B. Pakrasi, Y. J. Tang (2010) Isoleucine Synthesis Pathway in Cyanobacterial Species. Microbiology 56, 596-602. PubMed
X. Feng, H. Mouttaki, L. Lin, R. Huang, B. Wu, C. L. Hemme, Z. He, B. Zhang, L. M.Hicks, J. Xu, J. Zhou,Y. J. Tang (2009) Characterization of the central metabolic pathways inThermoanaerobacter sp. X514 via isotopomer-assisted metabolite analysis,?Appl. Environ. Microbiol.75, 5001-5008. PubMed
Q. Chen, B. Zhang, L. M. Hicks, Q. Zhang, J. M. Jez (2009) A liquid chromatography-tandemmass spectrometry-based assay for indole-2-acetic acid-amido synthetases. Anal.Biochem. 390, 149-154. PubMed
S. Alvarez, B. M. Berla, J. Sheffield, R. E. Cahoon, J. M. Jez, L. M. Hicks (2009) Comprehensive analysis of the Brassica juncea root proteome in response to cadmium exposure by complementary proteomic approaches. Proteomics 9, 2419-2431. PubMed
H. Chen, J. Hu, P. R. Chen, L. Lan, Z. Li, L. M. Hicks, A. R. Dinner, C. He (2008) The Pseudomonas aeruginosa multidrug efflux regulator MexR uses an oxidation sensing Mechanism. PNAS 105, 13586-13591. PubMed
A. C. Schroeder, S. Kumaran, L. M. Hicks, R. E. Cahoon, C. Halls, O. Yu, J. M. Jez, (2008) Contributions of conserved serine and tyrosine residues to catalysis, ligand binding, and cofactor processing in the active site of tyrosine ammonia lyase. Phytochem. 69,1496-1506. PubMed
K. Nagamune, L. M. Hicks, B. Fux, F. Brossier, E. N. Chini, L. D. Sibley (2008) The plant hormone abscisic acid controls calcium-dependent egress and development in the parasite Toxoplasma gondii. Nature 451, 207-211. PubMed
K. W. Earley, M. S. Shook, B. Brower-Toland, L. M. Hicks, C. S. Pikaard (2007) In vitro specificities of Arabidopsis co-activator histone acetyltransferases: implications for histone hyperacetylation in gene activation. Plant J. 52, 615-626. PubMed
L. M. Hicks, R. E. Cahoon, E. R. Bonner, R. S. Rivard, J. Sheffield, J. M. Jez (2007) In vitro and in vivo disulfide bond regulation of redox-active glutamate-cysteine ligase from Arabidopsis thaliana. Plant Cell. 19, 2653-2661. PubMed
K. M. Brendza, W. Haakenson, R. E. Cahoon, L. M. Hicks, L. H. Palavalli, B. J. Chiapelli, M. McLaird, J. P. McCarter, D. J. Williams, M. C. Hresko, and J. M. Jez (2007) Phosphoethanolamine N-methyltransferase (PMT-1) catalyses the first reaction of a new pathway for phosphocholine biosynthesis in Caenorhabditis elegans. Biochem. J.404, 439-448. PubMed
L. M. Hicks, C. J. Balibar, C. T. Walsh, N. L. Kelleher, and N. J. Hillson (2006) Probing intra vs interchain kinetic preferences of L-Thr acylation on the dimeric VibF subunit of vibriobactin synthetase with mass spectrometry. Biophysical J., 91, 2609-2619. Request Copy
L. M. Hicks, M. T. Mazur, L. M. Miller, P. C. Dorrestein, N. A. Schnarr, C. Khosla, and N. L. Kelleher (2006) Investigating nonribosomal peptide and polyketide biosynthesis by direct detection of intermediates on >70 kDa polypeptides using Fourier-transform mass spectrometry. ChemBioChem. 7, 904-907. PubMed
L. M. Hicks, M. C. Moffitt, L. L. Beer, B. S. Moore, and N. L. Kelleher (2006) Structural characterization of in vitro and in vivo intermediates on the loading module of microcystin synthetase. ACS Chem. Biol, 1, 93-102. PubMed
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Dr. Jan Jaworski
(Donald Danforth Plant Science Center)
Selected Peer-Reviewed Publications 2010-2000
Han, J., Clement, J. M., Li, J., King, A., Ng, S. & Jaworski, J. G. (2010) The cytochrome P450 CYP86A22 is a fatty acyl-CoA omega-hydroxylase essential for Estolide synthesis in the stigma of Petunia hybrida, J Biol Chem. 285, 3986-96. PubMed
Chen, M., Markham, J. E., Dietrich, C. R., Jaworski, J. G. & Cahoon, E. B. (2008) Sphingolipid long-chain base hydroxylation is important for growth and regulation of sphingolipid content and composition in Arabidopsis, Plant Cell. 20, 1862-78. PubMed
King, A., Nam, J. W., Han, J., Hilliard, J. & Jaworski, J. G. (2007) Cuticular wax biosynthesis in petunia petals: cloning and characterization of an alcohol-acyltransferase that synthesizes wax-esters, Planta. 226, 381-94. PubMed
Markham, J. E. & Jaworski, J. G. (2007) Rapid measurement of sphingolipids from Arabidopsis thaliana by reversed-phase high-performance liquid chromatography coupled to electrospray ionization tandem mass spectrometry, Rapid Commun Mass Spectrom. 21, 1304-14. PubMed
Tsegaye, Y., Richardson, C. G., Bravo, J. E., Mulcahy, B. J., Lynch, D. V., Markham, J. E., Jaworski, J. G., Chen, M., Cahoon, E. B. & Dunn, T. M. (2007) Arabidopsis mutants lacking long chain base phosphate lyase are fumonisin-sensitive and accumulate trihydroxy-18:1 long chain base phosphate, J Biol Chem. 282, 28195-206. PubMed
Blacklock, B. J. & Jaworski, J. G. (2006) Substrate specificity of Arabidopsis 3-ketoacyl-CoA synthases, Biochem Biophys Res Commun. 346, 583-90. PubMed
Markham, J. E., Li, J., Cahoon, E. B. & Jaworski, J. G. (2006) Separation and identification of major plant sphingolipid classes from leaves, J Biol Chem. 281, 22684-94. PubMed
Paul, S., Gable, K., Beaudoin, F., Cahoon, E., Jaworski, J., Napier, J. A. & Dunn, T. M. (2006) Members of the Arabidopsis FAE1-like 3-ketoacyl-CoA synthase gene family substitute for the Elop proteins of Saccharomyces cerevisiae, J Biol Chem. 281, 9018-29. PubMed
Zhang, Y., Li, S. Z., Li, J., Pan, X., Cahoon, R. E., Jaworski, J. G., Wang, X., Jez, J. M., Chen, F. & Yu, O. (2006) Using unnatural protein fusions to engineer resveratrol biosynthesis in yeast and Mammalian cells, J Am Chem Soc. 128, 13030-1. PubMed
Jaworski, J. & Cahoon, E. B. (2003) Industrial oils from transgenic plants, Curr Opin Plant Biol. 6, 178-84. PubMed
Blacklock, B. J. & Jaworski, J. G. (2002) Studies into factors contributing to substrate specificity of membrane-bound 3-ketoacyl-CoA synthases, Eur J Biochem. 269, 4789-98. PubMed
Ghanevati, M. & Jaworski, J. G. (2002) Engineering and mechanistic studies of the Arabidopsis FAE1 _-ketoacyl-CoA synthase, FAE1 KCS, Eur J Biochem. 269, 3531-9. PubMed
Dehesh, K., Tai, H., Edwards, P., Byrne, J. & Jaworski, J. G. (2001) Overexpression of 3-ketoacyl-acyl-carrier protein synthase IIIs in plants reduces the rate of lipid synthesis, Plant Physiol. 125, 1103-14. PubMed
Ghanevati, M. & Jaworski, J. G. (2001) Active-site residues of a plant membrane-bound fatty acid elongase beta-ketoacyl-CoA synthase, FAE1 KCS, Biochim Biophys Acta. 1530, 77-85. PubMed
White, J. A., Todd, J., Newman, T., Focks, N., Girke, T., de Ilarduya, O. M., Jaworski, J. G., Ohlrogge, J. B. & Benning, C. (2000) A new set of Arabidopsis expressed sequence tags from developing seeds. The metabolic pathway from carbohydrates to seed oil, Plant Physiol. 124, 1582-94. PubMed
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Dr. Toni Kutchan
(Donald Danforth Plant Science Center)
Selected Peer-Reviewed Publications 2010-2007
Grobe, N., Lamsh?ft, M., Orth, R.G., Dräger, B., Kutchan, T.M., Zenk, M.H. and Spiteller, M. (2010) Urinary excretion of morphine and biosynthetic precursors in mice. Proc. Natl. Acad. Sci. USA (in press). PubMed
Nomura, T. and Kutchan, T.M. (2010)Three new O-methyltransferases are sufficient for all O-methylation reactions of Ipecac alkaloid biosynthesis in root culture of Psychotria ipecacuanha. J. Biol. Chem. 285, 7722-7738. PubMed
Higashi, Y., Smith, T.J., Jez, J.M. and Kutchan, T.M. (2010) Crystallization and preliminary X-ray diffraction analysis of salutaridine reductase from Papaver somniferum. Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. F66, 163-166. PubMed
Grobe, N., Zhang, B., Fisinger, U., Kutchan, T.M., Zenk, M.H. and Guengerich, F.P. (2009) Mammalian cytochrome P450 enzymes catalyze the phenol-coupling step in endogenous morphine biosynthesis. J. Biol. Chem. 284, 24425-24431. PubMed
Gesell, A., Rolf, M., D?az Ch?vez, M.L., Huang, F.-C., Ziegler, J. and Kutchan, T.M. (2009) CYP719B1 is salutaridine synthase, the phenol-coupling enzyme of morphine biosynthesis in opium poppy. J. Biol. Chem. 284, 24432-24442. PubMed
Kempe, K., Higashi, Y., Frick, S., Sabarna, K. and Kutchan, T.M. (2009) RNAi suppression of the morphine biosynthetic gene salAT and evidence of association of pathway enzymes. Phytochemistry 70, 579-589. PubMed
Nomura, T., Lara Quesada, A., Kutchan, T.M. (2008).The new ?-D-glucosidase in terpenoid-isoquinoline alkaloid biosynthesis in Psychotria ipecacuanha. J. Biol. Chem. 283, 34650-34659. PubMed
Winkler, A., _yskowski, A., Riedl, S., Puhl, M., Kutchan, T.M., Macheroux, P. and Gruber, K. A (2008).concerted mechanism for berberine bridge enzyme. Nat. Chem. Biol. 4, 739-741.
Winkler, A., Kutchan, T.M. and Macheroux, (2007) P. 6-S-Cysteinylation of bi-covalently attached FAD in berberine bridge enzyme tunes the redox potential for optimal activity. J. Biol. Chem. 282, 24437-24443. PubMed
Larkin, P.J., Miller, J., Allen, R.S., Millgate, A.G., Chitty, J.A., Gerlach, W.L., Frick, S., Kutchan, T.M. and Fist, A.J. (2007) Increasing morphinan alkaloid production by overexpressing codeinone reductase in transgenic Papaver somniferum. Plant Biotech. J. 5, 26-37. PubMed
Millgate, A.G., Pogson, B.J., Wilson, I.W., Kutchan, T.M., Zenk, M.H., Gerlach, W.L., Fist, A.J. and Larkin. P.J. (2004). Morphine-pathway block in top1 poppies. Nature 431, 413-414. PubMed
Frick, S., Kramell, R. and Kutchan, T.M. Metabolic engineering of a morphine biosynthetic P450 in opium poppy surpasses breeding. Metabolic Engineering 9, 169-176. PubMed
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Dr. Yair Shachar-Hill
(Michigan State University)
Selected Publications (10 most related to the CABS project)
Libourel IGL, Shachar-Hill Y (2008) Metabolic flux analysis in plants: from intelligent design to rational engineering. Annual Review of Plant Biology 59: 625-650.0 PubMed
Alonso AP, Raymond P, Hernould M, Rondeau-Mouro C, de Graaf A, Chourey P, Lahaye M, Shachar-Hill Y, Rolin D, Dieuaide-Noubhani M (2007) A metabolic flux analysis to study the role of sucrose synthase in the regulation of the carbon partitioning in central metabolism in maize root tips. Metabolic Engineering 9: 419-432. PubMed
Alonso AP, Goffman FD, Ohlrogge JB, Shachar-Hill Y (2007) Carbon conversion efficiency and central metabolic fluxes in developing sunflower (Helianthus annuus L.) embryos. Plant Journal 52: 296-308. PubMed
Libourel I, Gehan J, Shachar-Hill Y (2007) Design of substrate label for steady state flux measurements in plant systems using the metabolic network of Brassica napus embryos. Phytochemistry 68: 2211-2221. PubMed
McKinlay JB, Shachar-Hill Y, Zeikus JG, Vieille C (2007) Determining Actinobacillus succinogenes metabolic pathways and fluxes by NMR and GC-MS analyses of 13C-labeled metabolic product isotopomers. Metabolic Engineering. 9: 177-192. PubMed
Last RL, Jones AD, Shachar-Hill Y (2007) Towards the plant metabolome and beyond. Nature Reviews Molecular Cell Biology 8: 167 - 174. PubMed
Goyer A, Collakova E, Shachar-Hill Y, Hanson AD (2007) Functional Characterization of a Methionine _-Lyase in Arabidopsis and its Implication in an Alternative to the Reverse Trans-sulfuration Pathway. Plant and Cell Physiology 48: 232-242. PubMed
Schwender J, Shachar-Hill Y, Ohlrogge JB (2006) Mitochondrial metabolism in developing embryos of brassica napus. Journal of Biological Chemistry 281: 34040-34047. PubMed
Ratcliffe RG and Shachar-Hill Y (2006) Measuring multiple fluxes through plant metabolic networks. Plant Journal 45: 490-511. PubMed
Schwender J, Goffmann F, Ohlrogge JB, Shachar-Hill Y (2004) Rubisco without the Calvin Cycle improves the carbon efficiency of developing green seeds. Nature 432: 779-782. PubMed
Schwender J, Ohlrogge JB, Shachar-Hill Y (2004) Understanding flux in plant metabolic networks. Current Opinion in Plant Biology 7:309-317. PubMed
Schwender J, Ohlrogge JB, Shachar-Hill Y (2003) A flux model of glycolysis and the oxidative pentoseophosphate pathway in developing Brassica napus embryos. Journal of Biological Chemistry 278: 29442-29453. PubMed
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Dr. Xuemin (Sam) Wang
(Donald Danforth Plant Science Center)
Selected Publications (10 most related to the CABS project)
Hong Y, Devaiah SP, Bahn SC, Thamasandra BN, Li M, Welti R, Wang X (2009) Phospholipase D_ and phosphatidic acid enhance Arabidopsis nitrogen signaling and growth. Plant Journal 58:376-387. PubMed
Hong Y, Pan X, Welti R, Wang X (2008) Phodpholipase D_3 regulates Arabidopsis response to salinity and water deficits. Plant Cell. 20: 803-816. PubMed
Li W, Li M, Welti R, Wang X. (2008) Differential degradation of extraplastidic and plastidic lipids during freezing and post-freezing recovery in Arabidopsis thaliana. J. Biol. Chem. 283: 461-468. PubMed
Li M, Hong Y, Wang X (2009) Phospholipase D- and phosphatidic acid-mediated signaling in plants. Biochem Biophys Acta 179:927-935. PubMed
Pan X, Welti R, Wang X (2008) Simultaneous quantificiation of major phytohormones and related compunds in crude plant extracts by liquid chromatography-electrospray tandem mass spectrometry. Phytochemistry 69:1773-1781. PubMed
Yang W, Devaiah S, Pan X, Isaac G, Welti R, Wang X (2007) AtPLAI is an acyl hydrolase involved in basal jasmonic acid production and Arabidopsis resistance to Botrytis cinerea. J. Biol. Chem. 282:18116-18128. PubMed
Devaiah SP, Pan X, Roth M, Welti R, Wang X (2007) Enhancing seed quality and viability by suppressing phospholipase D in Arabidopsis. Plant Journal. 50, 950-957. PubMed
Mishra, G, Zhang W, Deng F, Zhao J, Wang X (2006) A bifurcating pathway directs abscisic acid effects on stomatal closure and opening in Arabidopsis. Science 312: 264-266. PubMed
Li M, Qin C, Welti R, Wang X (2006) Double knockouts of phospholipase D_1 and _2 in Arabidopsis affect root elongation during phosphate-limited growth, but do not affect root hair patterning. Plant Physiol. 140: 761-770. PubMed
Devaiah SP, Roth MR, Baughman E, Li M, Welti R, Wang X (2006) Lipid Profiling to quantitatively display polar glycerolipid species and the role of phospholipase D_1 in the species in Arabidopsis tissues. Phytochemistry 67: 1907-1924.
Li M, Welti R, Wang X (2006) Quantitative profiling of Arabidopsis polar glyerolipids in reposnse to phosphorus starvation. Roles of phospholipases D_1 and D_2 in phosphatidylcholine hydrolysis and digalactosyldiacylglycerol accumulation in phosphorus-starved plants. Plant Physiol. 142:750-761. PubMed
Li W, Li M, Welti R, Wang X (2004). The plasma membrane-bound phospholipase D_ enhances freezing tolerance in Arabidopsis. Nature Biotech 22: 427-433. PubMed
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Dr. Terry Woodford-Thomas
(Donald Danforth Plant Science Center)
Selected Peer-Reviewed Publications 2010-1995
Semenyuk, E., Schmidt, M.A., Beachy, R.N., Moravec, T. and Woodford-Thomas, T. (2010). Adaptation of an ecdysone-based genetic switch for transgene expression in soybean seeds. Trans Res (in press). PubMed
Semenyuk, E., Schmidt, M., Moravec, T. and Woodford-Thomas, T. (2009). Engineering seeds for the production and delivery of oral vaccines, in Modification of Seed Composition to Promote Health and Nutrition (Krishnan, ed.), Chapter 6, Amer. Soc. of Agronomy, Crop Sci. Soc. of Amer. Monograph. Request Copy
Moravec, T., Schmidt, M.A., Herman, E.M. and Woodford-Thomas,T. (2007). Production of Escherichia coli heat labile toxin (LT) B subunit in soybean seed and analysis of its immunogenicity as an oral vaccine. Vaccine 25: 1647-1657. PubMed
Koo J C, Asurmendi S, Bick J, Woodford-Thomas T, Beachy RN (2004). Ecdysone agonist-inducible expression of a coat protein gene from Tobacco Mosaic Virus confers viral resistance in transgenic Arabidopsis. Plant J 37(3): 439-448. PubMed
He X, Hasegawa K, Johnson K, Pingel J, Woodford-Thomas T, Thomas ML. (2002) Expression of a CD45 chimeric protein in T lymphocytes shift the signaling response to antigen. Eur J Immunol 32:2578-87. Request Copy
Chen M-S, Hurov J, White L, Woodford-Thomas T, Piwnica-Worms H. (2001) Analysis of Mice Lacking the Cdc25 protein phosphatase. Mol Cell Biol 21:3853-61. Request Copy
Ulyanova T, Blasioli J, Woodford-Thomas T, Thomas ML.(1999) The sialoadhesin CD33 is a myeloid-specific inhibitory receptor. Eur J Immunol. 29:3440-3449 Request Copy
Wong ECC, Woodford-Thomas T, Thomas ML. (1996) Transmembrane protein tyrosine phosphatases. Biomembranes 6:77-106. Request Copy
Roy G, Matthews J, Woodford-Thomas T, Thomas ML. (1995) The function of protein tyrosine phosphatases in immune function. Adv Protein Phosphatases 9:121-139. Request Copy
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