|
Roger Beachy's Laboratory |








 |
Journals
|
|
|
|
JOURNAL
ARTICLES: 1997 to 2002 |
|
|
144. |
Kahn, T.W., R.N. Beachy, and M.M. Falk.
1997. Cell-free expression of a GFP fusion protein allows quantitation
in vitro and in vivo. Curr Biol 7:R207-R208. |
|
|
|
145. |
Beachy,
R.N. 1997. The 2',5'A antiviral system in plants: A dose of mammalian
medicine. Nat Biotechnol 14:1538-39. |
|
|
|
146. |
Arce-Johnson,
P., U. Reimann-Philipp, H.S. Padgett, R. Ravera-Bustamante, and R.N.
Beachy. 1997. Requirement of the movement protein for long distance spread
of tobacco mosaic virus in grafted plants. Mol Plant Microbe Interact
10:691-699. |
|
|
|
147. |
Marcos,
J.F. and R.N. Beachy. 1997. Transgenic accumulation of two plant virus
proteins on a single self-processing polypeptide. J Gen Virol
78:1771-1778. |
 |
|
|
148. |
Aleman-Verdaguer,
M.-E., Goudou-Urbino, C., Dubern, J., Beachy, R.N., Fauquet, C.M. 1997.
Analysis of the sequence diversity of the P1, HC, P3, Nib and CP genomic
regions of several yam mosaic potyvirus isolates: Implications for the
intraspecies molecular diversity of potyviruses. J Gen Virol
78:1253-1264. |
 |
|
|
149. |
Padgett,
H.S., Y. Watanabe, and R.N. Beachy. 1997. Identification of the
tobamovirus protein that activates the N gene-mediated hypersensitive
response. Mol Plant Microbe Interact 10:709-715. |
|
|
|
150. |
Yin,
Y., Q. Zhu, S. Dai, C. Lamb, and R.N. Beachy. 1997. RF2a, a bZIP
transcriptional activator of the phloem-specific rice tungro bacilliform
virus promoter, functions in vascular development. EMBO J 16:5247-5259. |
 |
|
|
151. |
Yin,
Y., L. Chen, and R.N. Beachy. 1997. Promoter elements required for
phloem-specific gene expression from the RTBV promoter in rice. Plant J
12:1179-1188. |
|
|
|
152. |
Bendahmane,
M., J.H. Fitchen, G. Zhang, and R.N. Beachy. 1997. Studies of coat protein
mediated resistance to tobacco mosaic tobamovirus: Correlation between assembly
of mutant coat proteins and resistance. J Virol 71:7942-7950. |
 |
|
|
153. |
Ceriani,
M.F., J.F. Marcos, H.E. Hopp, and R.N. Beachy. 1997. Simultaneous
accumulation of multiple viral coat proteins from a TEV-NIa based
expression vector. Plant Mol Biol 36:239-248 |
|
|
|
154. |
Oparka,
K.J., D.A.M. Prior, S. Santa Cruz, H.S. Padgett, and R.N. Beachy. 1997.
Gating of epidermal plasmodesmata is restricted to the leading edge of
expanding infection sites of tobacco mosaic virus. Plant J 12:781-789. |
|
|
|
155. |
Ares,
X., G. Calamante, S. Cabral, P. Hemenway, R.N. Beachy and A. Mentaberry.
1998. Transgenic plants expressing PVX ORF2 protein (p24) are resistant to
TMV and Ob tobamoviruses. J Virol 72:24-31. |
 |
|
|
156. |
Kahn,
T.W., M. Lapidot, M. Heinlein, C. Reichel, B. Cooper, R. Gafny, and R.N.
Beachy. 1998. Domains of the TMV movement protein involved in subcellular
localization. Plant J 15(1):15-25. |
|
|
|
157. |
Heinlein,
M., M. Wood, T. Thiel, and R.N. Beachy. 1998. Targeting and modification
of prokaryotic cell-cell junctions by tobacco mosaic virus cell-to-cell
movement protein. Plant J 14(3): 345-351. |
|
|
|
158. |
Heinlein,
M., H.S. Padgett, S. Gens, B. Pickard, S.J. Casper, B.L. Epel, and R.N.
Beachy. 1998. Changing patterns of localization of TMV movement protein
and replicase to endoplasmic reticulum and microtubules during infection.
Plant Cell 10:1107-1120. |
 |
|
|
159. |
Lewis,
J.K., M. Bendahamane, T.J. Smith, R.N. Beachy, and G. Siuzdak. 1998.
Identification of viral mutants by mass spectrometry. Proc Natl Acad Sci
USA 95:8596-8601. |
 |
|
|
160. |
Opalka,
N., Brugidou, C., Bonneau, C., Nicole, M., Beachy, R. N., Yeager, M.,
& Fauquet, C. M. 1998. Movement of rice yellow mottle virus between
xylem cells through pit membranes. Proc Natl Acad of Sci USA 95:
3323-3328. |
 |
|
|
161. |
Verdaguer,
B., de Kochko, A., Fux, C., Beachy, R. N., & Fauquet, C. M. 1998.
Functional organization of the cassava vein mosaic virus (CsVMV) promoter.
Plant Mol Biol 37:1055-1067. |
|
|
|
162. |
Bonneau,
C., C. Brugidou, L. Chen, .N. Beachy, C. Fauquet. 1998. Expression of the
rice yellow mottle virus P1 protein in vitro and in vivo and its
involvement in virus spread. Virology 244:79-86. |
|
|
|
163. |
Chen,
L., S. Zhang, R.N. Beachy, C.M. Fauquet. 1998. Establishing a protocol for
consistent large-scale production of transgenic rice plants. Plant Cell
Rep 18:25-31. |
|
|
|
164. |
De
Kochko, A., B. Verdaguer, N. Taylor, R. Carcamo, R.N. Beachy, and C.M.
Fauquet. 1998. Cassava vein mosaic virus (CsVMV), type species for a new
genus of plant double stranded DNA viruses? Arch Virol 143:945-962. |
|
|
|
165. |
Franck-Duchenne,
M., R.N. Beachy, and C.M. Fauquet. 1998. In vitro stem elongation of sweet
pepper in media containing 24-epi brassinolide. Plant Cell Tissue Organ Cult
53:79-84. |
|
|
|
166. |
Gonzalez,
A.E., C. Schopke, N.J. Taylor, R.N. Beachy, and C.M. Fauquet. 1998.
Regeneration of transgenic cassava plants (Manihot esculenta Crantz)
through Agrobacterium-mediated transformation of embryogenic suspension
cultures. Plant Cell Rep 17:827-831. |
|
|
|
167. |
Reichel,
C., and R.N. Beachy. 1998. Tobacco mosaic virus infection induces severe
morphological changes of the endoplasmic reticulum. Proc Natl Acad Sci
USA 95:11169-11174 |
 |
|
|
168. |
Chen,
L., P. Marmey, N. Taylor, J.P. Brizard, C. Espinoza, P. D'Cruz, H. Huet,
S. Zhang, A. deKochko, R.N. Beachy, and C.M. Fauquet. 1998. Expression to
inheritance of multiple transgenes in rice plants. Nat Biotechnol
16:1060-1064. |
|
|
|
169. |
Umaharan,
P., M. Padidam, R.H. Phelps, R.N. Beachy and C.M. Fauquet. 1998.
Distribution and diversity of geminiviruses in Trinidad and Tobago.
Phytopathology 88(12):1262-1268. |
|
|
|
170. |
Karrer,
E.E., R.N. Beachy and C.A. Holt. 1998. Cloning of tobacco genes that
elicit the hypersensitive response. Plant Mol Biol 36:681-690. |
|
|
|
171. |
Ceriani,
M.F., J.F. Marcos, H.E. Hopp, R.N. Beachy. 1998. Simultaneous accumulation
of multiple viral coat proteins from a TEV-Nia based expression vector.
Plant Mol Biol 36:239-248. |
|
|
|
172. |
Mas,
P. and R.N. Beachy. 1998. Distribution of TMV movement protein in single
living protoplasts immobilized in agarose. Plant J 15(6):835-842. |
|
|
|
173. |
Zhang, S., W-Y Song, L. Chen, D. Ruan, N.
Taylor, P. Ronald, R.N. Beachy and C.M. Fauquet. 1998. Transgenic
elite Indica rice varieties resistant to xanthomonas oryzae pv.
oryzae molecular breeding. Mol Breed 4:551-558. |
|
|
|
174. |
Marmey,
P., B. Bothner, E. Jacquot, A. deKochko, P. Yot, G. Siuzdak, R.N. Beachy, C. M.
Fauquet, 1999. Rice tungro bacilliform virus open reading frame 3 encodes a single 37Kda
coat protein. Virology 253:319-326. |
|
|
|
175. |
Beachy,
R.N. 1999. Coat-protein-mediated resistance to tobacco mosaic virus:
Discovery mechanisms and exploitation. Phil Trans R Soc Lond B
354:659-664. |
|
|
|
176. |
Szécsi,
J., X.S. Ding, C.O. Lim, M. Bendahame, M.J. Cho, R.S. Nelson, R.N. Beachy.
1999. Development of TMV Infection Sites in Nicotiana benthamiana. Mol Plant Microbe Interact
12:143-152. |
|
|
|
177. |
Padidam,
M., V.S. Reddy, R.N. Beachy and C. M. Fauquet. 1999. Molecular
characterization of a plant mitochondrial chaperone GrpE. Plant Mol Biol 39:871-881. |
|
|
|
178. |
Padidam,
M., R.N. Beachy and C. M. Fauquet. 1999. A phage single-stranded DNA (ssDNA)
binding protein complements ssDNA accumulation of a geminivirus and
interferes with viral movement. J Virol 73(2):1609-1616. |
 |
|
|
179. |
Lazarowitz,
S.G. and R. N. Beachy. 1999. Viral movement proteins as probes for
intracellular and intercellular trafficking plants. Plant
Cell 11:535-548. |
|
|
|
180. |
Bendahmane, M. and R.N. Beachy. 1999.
Control of tobamovirus infections via pathogen-derived resistance.
Adv Virus Res 53:369-386. |
|
|
|
181. |
Bendahmane,
M., M. Koo, E. Karrer and R. N. Beachy. 1999. Display of epitopes on the
surface of tobacco mosaic virus: Impact of change and isoelectric point of
the epitope on virus-host interaction. J Mol Biol 290:9-20. |
|
|
|
182. |
Koo,
M., M. Bendahmane, G. A. Lettieri, A. D. Paoletti, T.E. Lane, J.H. Fitchen,
M.J. Buchmeier, R.N. Beachy. 1999. Protective immunity against murine
hepatitis virus (MHV) induced by intranasal or subcutaneous administration
of hybrids of tobacco mosaic virus that carries an MHV epitope. Proc
Natl Acad Sci USA (96)7774-7779. |
 |
|
|
183. |
Pickard,
B.G., R.N. Beachy. 1999. Intercellular connections are developmentally
controlled to help move molecules through the plant. Cell (98)5-8. |
|
|
|
184. |
Kawakami,
S., H.S. Padgett, D. Hosokawa, Y. Okada, R. N. Beachy, Y. Watanabe. 1999.
Phosphorylation and/or presence of serine 37 in the movement protein of
tomato mosaic tobamovirus is essential for intracellular localization and
stability in vivo. J Virol 73(8):6831-6840. |
 |
|
|
185. |
Reichel, C., P. Mas, and R.N. Beachy. 1999.
The role of the ER and cytoskeleton in viral trafficking. Trends
Plant Sci 4:458-462. |
|
|
|
186. |
Chatterji,
A., M. Padidam, R. N. Beachy and C.M. Fauquet. 1999. Identification of
replication specificity determinants in two strains of tomato leaf curl virus from New
Delhi. J Virol 73(7):5481-5489. |
 |
|
|
187. |
Más,
P. and R. N. Beachy. 1999. Replication of tobacco mosaic virus on
endoplasmic reticulum and role of the cytoskeleton and virus movement
protein in intracellular distribution of viral RNA. J Cell Biol
145(5):945-958. |
 |
|
|
188. |
Staczek,
J., M. Bendahmane, L. B. Gilleland, R. N. Beachy, and H. E. Gilleland Jr.
2000. Immunization with a chimeric tobacco mosaic virus containing
an epitope of outer membrane protein F of Pseudomonas
aeruginosa provides protection against challenge with P. aeruginosa. Vaccine 18:2266-2274 |
|
|
|
189. |
Gilleland,
Jr., H.E., L. B. Gilleland, J. Staczek, B. Harty, A. Garcia-Sastre, P.
Palese, F. R. Brennan, W.D.O. Hamilton, M. Bendahmane, R .N. Beachy.
2000. Chimeric animal
and plant viruses expressing epitopes of outer membrane protein F as a
combined vaccine against Pseudomonas
aeruginosa lung infection. FEMS
Immunol Med Microbiol 27:291-297.
|
|
|
|
190. |
Brill,
L.M., R.S. Nunn, T.W. Kahn, M. Yeager, and R.N. Beachy. 2000. Recombinant
tobacco mosaic virus movement protein is an RNA-binding, a'-helical
membrane protein. Proc Natl Acad Sci USA (97):7112-7117. |
 |
|
|
191. |
Reichel, C. and R.N. Beachy. 2000.
Degradation of tobacco mosaic virus movement protein by the 26S
proteasome. J Virol 74:3330-3337. |
|
|
|
192. |
Más,
P. and R. N. Beachy. 2000.
Role of microtubules in the intracellular distribution of tobacco
mosaic virus movement protein. Proc
Natl Acad Sci USA 97:12345-12349. |
|
|
|
193. |
Fondong,
V.N., J.S. Pita, M.E.C. Rey, A. deKochko, and R.N. Beachy. 2000. Evidence
of synergism between African cassava mosaic virus and a new
double-recombinant geminivirus infecting cassava in Cameroon. J Gen
Virol 81:287-297. |
 |
|
|
194. |
Opalka,
N., M. Tihova, C. Brugidou, A. Kumar, R. N. Beachy, C.M. Fauquet, and M.
Yeager. 2000.
Structure of native and expanded sobemoviruses by electron cryo-microscopy
and image reconstruction. J
Mol Biol 303:197-211. |
|
|
|
195. |
Beachy,
R. N. and M. Heinlein. 2000. Role
of P30 in replication and spread of TMV.
Traffic 1:540-544. |
|
|
|
196. |
Qu,
C., L. Liljas, N. Opalka, C. Brugidou, M. Yeager, R. N. Beachy, C. M.
Fauquet, J.E. Johnson, and T. Lin. 2000.
3D domain swapping of a molecular switch for quasi-equivalent symmetry
modulates the stability of an icosahedral virus.
Structure 8:1095-1103. |
|
|
|
197. |
Dai,
S., P. Zheng , P. Marmey , S. Zhang, W. Tian, S. Chen , R. N. Beachy, and
C. M. Fauquet. 2001. Comparative
analysis of transgenic rice plants obtained by Agrobacterium-mediated
transformation and particle bombardment.
Mol Breed 7:25-33. |
|
|
|
198. |
Petruccelli,
S., S. Dai, R. Carcamo, Y. Yin, S. Chen, and R. N. Beachy.
2001. Transcription
factor RF2a alters expression of the rice tungro bacilliform virus
promoter in transgenic tobacco plants.
Proc Natl Acad Sci USA 98:7635-7640. |
|
|
|
199. |
Kotlizky,
G., A. Katz, J. van der Laak, V. Boyko, M. Lapidot, R.N. Beachy, M.
Heinlein, and B. Epel. 2001. A dysfunctional movement protein of tobacco mosaic virus
interferes with targeting of wild-type movement protein to microtubules. Mol
Plant Microbe Interact 14(7):895-904. |
|
|
|
200. |
Dai,
S., R. Carcamo, Z. Zhang, S. Chen, and R. N. Beachy.
2001. Bacterial
cytosine deaminase gene used as a conditional negative selection marker in
transgenic rice plants.
Plant Cell Rep 20:738-743. |
|
|
|
201. |
Bendahmane,
M., J. Szecsi, I. Chen, R.H. Berg, R.N.Beachy. 2002. Characterization of
mutant tobacco mosaic virus coat protein that interferes with virus
cell-to-cell movement. Proc
Natl Acad Sci USA 99:3645-3650. |
|
|
|
202. |
Zhu,
Q., M. Ordiz, T. Dabi. R.N. Beachy, C. Lamb.
2002. Rice TATA binding protein interacts functionally with
transcription factor IIB and the RF2a bZIP transcriptional activator in an
enhanced plant in vitro transcription system.
Plant Cell 14: 795-803. |
|
|
|
203. |
Ordiz, M.I., C.F. Barbas III, and R. N.
Beachy. 2002. Regulation of transgene expression in plants with polydactyl
zinc finger transcription factors. Proc Natl Acad Sci
U S A 99:13290-13295. |
|
|
|
204. |
Beachy, R.N. and M.I.
Ordiz. 2002. The fingers of gene regulation in plants. ISB News Report:December
2002:5-6. |
|
|
|
205. |
Stege,
J.T., X. Guan, T. Ho, R.N. Beachy, and C.F. Barbas III. 2002. Controlling
gene expression in plants using synthetic zinc finger transcription
factors. Plant J 32:1077-1086. |
|
|
|
206. |
Brugidou, C. N. Opalka, M. Yeager, R.N.
Beachy, and C.M. Fauquet. 2002. Stability of Rice Yellow Mottle Virus and
cellular compartmentalization during the infection process in Oryza
sativa (L.). Virology 297:98-108. |
|
|
|
|